| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1389 |
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| Symbol | narX |
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| ID | 6272661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1265363 |
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| End bp | 1267159 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641725495 |
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| Product | nitrate/nitrite sensor protein NarX |
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| Protein accession | YP_001880005 |
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| Protein GI | 187731932 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0922186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAC GTTGTCTCTC TCCGCTCACC CTGGTTAATC AGGTTGCGCT TATTGTGTTG
CTTTCTACTG CTATTGGACT GGCAGGGATG GCGGTTTCTG GCTGGCTGGT GCAAGGCGTT
CAGGGCAGCG CCCATGCGAT CAACAAAGCG GGATCGCTGC GCATGCAAAG TTACCGTCTG
TTGGCGGCAG TGCCATTAAG TGAGAAAGAC AAGCCCTTAA TTAAAGAGAT GGAACAAACG
GCATTTAGCG CCGAGTTAAC TCGAGCAGCA GAACGAGACG AACAACTGGC GCAATTACAG
GGTTTACAAG ATTACTGGCG TAATGAACTG ATCCCTGCAC TGATGCGTGC ACAAAACCGC
GAAACGGTGT CAGCGGATGT CAGCCAGTTT GTTGCCGGGC TTGATCAGCT GGTATCTGGT
TTTGACCGCA CCACGGAAAT GCGCATTGAG ACAGTGGTAC TGGTCCATCG GGTAATGGCG
GTATTTATGG CACTTTTACT GGTGTTCACT ATTATCTGGT TGCGGGCGCG ACTGCTACAA
CCGTGGCGGC AACTGCTGGC AATGGCGAGT GCCGTCAGTC ATCGCGATTT TACCCAACGC
GCGAACATCA GCGGGCGCAA CGAAATGGCG ATGCTTGGAA CTGCATTGAA CAATATGTCT
GCAGAACTGG CCGAAAGTTA TGCCGTACTT GAGCAGCGGG TTCAGGAGAA AACCGCCGGG
CTGGAGCATA AAAATCAGAT CCTCTCTTTT TTATGGCAGG CTAACCGCCG TTTGCATTCC
CGCGCCCCGC TGTGTGAACG CCTGTCACCT GTACTCAACG GCTTACAGAA TTTAACCCTG
CTACGTGATA TCGAACTGCG GGTGTATGAC ACTGATGATG AAGAGAATCA TCAGGAGTTT
ACCTGCCAGC CAGATATGAC TTGTGATGAT AAAGGCTGCC AGCTCTGCCC GCGCGGCGTA
TTACCCGTTG GTGATCGCGG CACAACCCTG AAGTGGCGAC TGGCTGACTC TCATACGCAG
TACGGTATTT TGCTGGCGAC CCTGCCGCAG GGGCGTCATC TTAGCCATGA TCAACAACAA
CTGGTGGATA CCCTGGTTGA ACAACTCACC GCCACGCTGG CGCTGGATCG CCATCAGGAA
CGTCAGCAAC AGTTGATCGT GATGGAAGAG CGTGCCACCA TTGCGCGCGA ACTGCATGAT
TCTATTGCCC AATCTCTCTC TTGCATGAAG ATGCAGGTGA GTTGTTTACA GATGCAGGGC
GATGCGCTGC CAGCAAGCAG CCGCGAACTG TTAAGTCAGA TCCGTAACGA ACTGAATGCA
TCCTGGGCGC AGTTGCGTGA ATTGCTCACC ACATTCCGCT TGCAGCTCAC CGAGCCTGGA
TTACGTCCGG CGCTGGAGGC GAGTTGCGAA GAGTACAGCG CCAAATTTGG CTTCCCGGTG
AAGCTGGATT ATCAATTGCC GCCTCGTCTG GTGCCTTCAC ATCAGGCAAT CCACTTGTTG
CAAATTGCCC GTGAGGCATT AAGTAACGCC CTCAAACATT CGCAAGCGAG TGAGGTCGTG
GTGACGGTGG CGCAAAACGA TAATCAGGTC AAACTGACCG TCCAAGATAA CGGCTGCGGC
GTGCCTGAAA ATGCCATCCG CAGCAATCAC TACGGCATGA TAATAATGCG CGACCGTGCG
CAAAGTTTAC GAGGCGATTG CCGCGTCCGC CGTCGTGAAT CAGGTGGCAC CGAAGTGGTG
GTCACCTTTA TTCCCGAAAA AACTTTCACA GACGTCCAAG GAGATACCCA TGAGTAA
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| Protein sequence | MLKRCLSPLT LVNQVALIVL LSTAIGLAGM AVSGWLVQGV QGSAHAINKA GSLRMQSYRL
LAAVPLSEKD KPLIKEMEQT AFSAELTRAA ERDEQLAQLQ GLQDYWRNEL IPALMRAQNR
ETVSADVSQF VAGLDQLVSG FDRTTEMRIE TVVLVHRVMA VFMALLLVFT IIWLRARLLQ
PWRQLLAMAS AVSHRDFTQR ANISGRNEMA MLGTALNNMS AELAESYAVL EQRVQEKTAG
LEHKNQILSF LWQANRRLHS RAPLCERLSP VLNGLQNLTL LRDIELRVYD TDDEENHQEF
TCQPDMTCDD KGCQLCPRGV LPVGDRGTTL KWRLADSHTQ YGILLATLPQ GRHLSHDQQQ
LVDTLVEQLT ATLALDRHQE RQQQLIVMEE RATIARELHD SIAQSLSCMK MQVSCLQMQG
DALPASSREL LSQIRNELNA SWAQLRELLT TFRLQLTEPG LRPALEASCE EYSAKFGFPV
KLDYQLPPRL VPSHQAIHLL QIAREALSNA LKHSQASEVV VTVAQNDNQV KLTVQDNGCG
VPENAIRSNH YGMIIMRDRA QSLRGDCRVR RRESGGTEVV VTFIPEKTFT DVQGDTHE
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