Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1377 |
Symbol | |
ID | 6270968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1256464 |
End bp | 1256856 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641725486 |
Product | putative transcriptional regulator |
Protein accession | YP_001879996 |
Protein GI | 187730349 |
COG category | [S] Function unknown |
COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00266632 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGTT TTTCTACACT GCTTAGTGTT CATCTTATTA GTATCGCGCT TTCTGTTGGG CTATTAACCT TACGTTTCTG GCTACGTTAT CAGAAGCATC CACAGGCATT TGCTCGCTGG ACGCGCATTG TGCCGCCGGT TGTCGATACG GTGTTATTGT TAAGCGGCAT TGCGTTGATG GCTAAAGCGC ACATCCTGCC ATTTTCCGGG CAGGCACAGT GGCTGACTGA AAAGCTGTTT GGAGTTATCA TTTATATCGT TTTGGGTTTT ATTGCACTCG ATTATCGTCG TATGCACAGT CAGCAGGCGC GCATTATTGC CTTCCCGCTG GCGTTGGTGG TGCTGTACAT CATCATTAAA CTCGCCACCA CAAAAGTACC GTTACTGGGG TAA
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Protein sequence | MTSFSTLLSV HLISIALSVG LLTLRFWLRY QKHPQAFARW TRIVPPVVDT VLLLSGIALM AKAHILPFSG QAQWLTEKLF GVIIYIVLGF IALDYRRMHS QQARIIAFPL ALVVLYIIIK LATTKVPLLG
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