Gene SbBS512_E1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1377 
Symbol 
ID6270968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1256464 
End bp1256856 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content47% 
IMG OID641725486 
Productputative transcriptional regulator 
Protein accessionYP_001879996 
Protein GI187730349 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00266632 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTT TTTCTACACT GCTTAGTGTT CATCTTATTA GTATCGCGCT TTCTGTTGGG 
CTATTAACCT TACGTTTCTG GCTACGTTAT CAGAAGCATC CACAGGCATT TGCTCGCTGG
ACGCGCATTG TGCCGCCGGT TGTCGATACG GTGTTATTGT TAAGCGGCAT TGCGTTGATG
GCTAAAGCGC ACATCCTGCC ATTTTCCGGG CAGGCACAGT GGCTGACTGA AAAGCTGTTT
GGAGTTATCA TTTATATCGT TTTGGGTTTT ATTGCACTCG ATTATCGTCG TATGCACAGT
CAGCAGGCGC GCATTATTGC CTTCCCGCTG GCGTTGGTGG TGCTGTACAT CATCATTAAA
CTCGCCACCA CAAAAGTACC GTTACTGGGG TAA
 
Protein sequence
MTSFSTLLSV HLISIALSVG LLTLRFWLRY QKHPQAFARW TRIVPPVVDT VLLLSGIALM 
AKAHILPFSG QAQWLTEKLF GVIIYIVLGF IALDYRRMHS QQARIIAFPL ALVVLYIIIK
LATTKVPLLG