Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1373 |
Symbol | lolB |
ID | 6272821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1252417 |
End bp | 1253040 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641725482 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_001879992 |
Protein GI | 187732184 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 3.52349e-16 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTGC CCGATTTTCG TCTTATCCGC CTGCTACCGC TGGCTGCTCT TGTGCTCACT GCCTGTTCCG TTACCACGCC CAAAGGTCCT GGCAAAAGCC CGGATTCGCC ACAATGGCGT CAGCATCAGC AAGACGTGCG CAATCTTAAT CAGTATCAGA CTCACGGCGC GTTCGCTTAT ATTTCTGACC AACAAAAAGT GTACGCCCGC TTTTTCTGGC AGCAAACCGG CCAGGATCGC TACCGTCTGC TGCTCACTAA CCCATTGGGC AGCACGGAAC TGGAGCTGAA TGCTCAACCG GGTAACGTGC AGTTAGTCGA CAATAAAGGT CAGCGTTATA CCGCCGATGA CGCCGAAGAG ATGATTGGCA AATTGACCGG AATGCCAATT CCGCTCAACA GCTTGCGCCA GTGGATTTTA GGTTTACCGG GTGATGCAAC CGACTACAAA CTGGACGACC AGTACCGCCT GAGCGAAATT ACCTACAGCC AGAATGGCAA AAACTGGAAG GTTGTTTATG GTGGTTATGA CACCAAAACG CATCCTGCGA TGCCAGCCAA TATGGAACTC ACCGACGGTG GTCAACGCAT CAAGTTAAAA ATGGATAACT GGATAGTGAA ATAA
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Protein sequence | MPLPDFRLIR LLPLAALVLT ACSVTTPKGP GKSPDSPQWR QHQQDVRNLN QYQTHGAFAY ISDQQKVYAR FFWQQTGQDR YRLLLTNPLG STELELNAQP GNVQLVDNKG QRYTADDAEE MIGKLTGMPI PLNSLRQWIL GLPGDATDYK LDDQYRLSEI TYSQNGKNWK VVYGGYDTKT HPAMPANMEL TDGGQRIKLK MDNWIVK
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