| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1370 |
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| Symbol | ychM |
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| ID | 6270589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1248664 |
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| End bp | 1250343 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641725479 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_001879989 |
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| Protein GI | 187731279 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000347462 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAAA TATTTTCCTC ACATGTGATG CCTTTCCGCG CTCTGATCGA CGCTTGCTGG
AAAGAAAAAT ATACTGCCGC ACGGTTTACC CGTGACCTGA TTGCCGGGAT AACCGTCGGG
ATTATTGCTA TCCCGCTGGC GATGGCGTTG GCTATTGGTA GTGGTGTGGC ACCCCAGTAC
GGTTTATATA CCGCAGCTGT TGCGGGGATT GTCATTGCTC TGACGGGTGG GTCACGCTTT
AGCGTTTCCG GTCCGACTGC GGCATTTGTG GTAATTCTCT ATCCCGTGTC GCAACAGTTT
GGACTGGCAG GACTGCTGGT TGCGGCCTTG CTGTCGGGGA TCTTTTTGAT TCTGATGGGT
CTGGCACGCT TTGGTCGCCT GATTGAGTAT ATTCCGGTTT CCGTCACCTT AGGTTTCACC
TCGGGTATCG GGATCACCAT CGGTACCATG CAGATTAAAG ATTTTCTCGG TCTGCAAATG
GTCCATGTCC CGGAACATTA TCTACAAAAA GTCGGCGCAT TATTTATGGC GCTGCCGACC
ATTAATGTGG GTGATGCTGC CATTGGCATT GTGACGCTAG GTATTCTTGT TTTTTGGCCG
CGTCTGGGCA TTCGTTTACC CGGTCACCTT CCGGCCTTGC TGGCTGGTTG CGCGGTGATG
GGGATTGTTA ACCTGCTCGG CGGACATGTT GCTACCATCG GTTCGCAATT CCACTACGTC
CTGGCCGATG GTTCTCAGGG TAACGGTATT CCGCAACTGC TGCCGCAACT GGTGCTGCCG
TGGGATCTGC CTAATTCAGA ATTCACGCTA ACCTGGGATT CTATTCGCAC ACTGCTGCCT
GCGGCATTCT CAATGGCAAT GCTCGGCGCA ATCGAATCTC TGCTCTGCGC CGTGGTACTG
GATGGTATGA CCGGGACGAA ACACAAGGCG AATAGCGAAC TGGTTGGACA GGGACTGGGG
AATATTATCG CTCCATTCTT TGGTGGTATT ACCGCTACAG CTGCCATCGC GCGTTCTGCC
GCTAACGTCC GTGCCGGGGC AACTTCCCCT ATCTCAGCGG TGATCCACTC TATTCTGGTT
ATTCTTGCCC TGCTGGTACT GGCACCGCTG CTCTCCTGGC TGCCGCTTTC CGCTATGGCA
GCCCTGCTGT TGATGGTGGC GTGGAACATG AGTGAAGCGC ATAAAGTGGT CGACTTGCTG
CGTCATGCAC CGAAAGATGA CATCATTGTC ATGCTGCTGT GCATGTCGCT GACCGTGCTG
TTTGATATGG TTATTGCCAT CAGCGTGGGG ATCGTGCTGG CATCGCTGCT GTTTATGCGT
CGTATCGCAC GTATGACTCG CCTGGCACCG GTAGTCGTAG ATGTTCCAGA CGATGTTCTG
GTACTGCGCG TTATTGGCCC GCTGTTTTTT GCTGCTGCTG AAGGCTTGTT CACGGACCTG
GAGTCACGTC TTGAAGGCAA ACGGATTGTG ATTCTGAAGT GGGATGCCGT TCCGGTACTT
GATGCTGGTG GTCTTGATGC GTTCCAGCGT TTTGTGAAGC GTCTGCCCGA AGGATGTGAA
CTGCGCGTGT GCAACGTGGA ATTCCAGCCA CTGCGCACTA TGGCTCGCGC AGGCATTCAA
CCGATCCCGG GACGCCTCGC GTTCTTCCCG AATCGTCGCG CGGCGATGGC GGATTTATAA
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| Protein sequence | MNKIFSSHVM PFRALIDACW KEKYTAARFT RDLIAGITVG IIAIPLAMAL AIGSGVAPQY
GLYTAAVAGI VIALTGGSRF SVSGPTAAFV VILYPVSQQF GLAGLLVAAL LSGIFLILMG
LARFGRLIEY IPVSVTLGFT SGIGITIGTM QIKDFLGLQM VHVPEHYLQK VGALFMALPT
INVGDAAIGI VTLGILVFWP RLGIRLPGHL PALLAGCAVM GIVNLLGGHV ATIGSQFHYV
LADGSQGNGI PQLLPQLVLP WDLPNSEFTL TWDSIRTLLP AAFSMAMLGA IESLLCAVVL
DGMTGTKHKA NSELVGQGLG NIIAPFFGGI TATAAIARSA ANVRAGATSP ISAVIHSILV
ILALLVLAPL LSWLPLSAMA ALLLMVAWNM SEAHKVVDLL RHAPKDDIIV MLLCMSLTVL
FDMVIAISVG IVLASLLFMR RIARMTRLAP VVVDVPDDVL VLRVIGPLFF AAAEGLFTDL
ESRLEGKRIV ILKWDAVPVL DAGGLDAFQR FVKRLPEGCE LRVCNVEFQP LRTMARAGIQ
PIPGRLAFFP NRRAAMADL
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