Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1349 |
Symbol | cvrA |
ID | 6268912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1227913 |
End bp | 1229649 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725461 |
Product | potassium/proton antiporter |
Protein accession | YP_001879971 |
Protein GI | 187732324 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.401684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATGCCA CAACAATAAT TAGCCTTTTC ATCTTAGGAT CCATCCTTGT CACCAGCAGT ATATTACTTA GTTCATTTTC TTCCCGTCTT GGCATTCCTA TTCTGGTTAT TTTTCTGGCG ATCGGCATGC TGGCAGGAGT CGATGGCGTC GGCGGTATCC CGTTTGATAA TTACCCCTTC GCCTACATGG TAAGTAACCT GGCACTGGCG ATTATTTTGC TCGACGGCGG GATGCGCACT CAGGCCAGTT CCTTTCGTGT GGCGTTAGGA CCGGCACTGT CGCTGGCGAC GCTGGGCGTG CTTATCACCT CTGGTTTAAC CGGCATGATG GCGGCGTGGC TGTTTAATCT TGATTTGATT GAAGGCTTAT TAATCGGCGC TATCGTCGGC TCTACCGATG CTGCAGCGGT CTTTTCTCTG CTGGGTGGTA AGGGGCTTAA CGAACGTGTT GGCTCGACGC TGGAAATTGA ATCCGGCAGT AATGATCCAA TGGCGGTCTT TCTGACGATT ACCCTGATTG CGATGATCCA GCAACATGAA AGCAGTGTCA GTTGGATGTT CGTGGTCGAT ATTCTGCAGC AATTTGGCCT CGGGATTGTC ATCGGACTTG GCGGTGGTTA TTTACTGCTG CAAATGATTA ATCGCATCGC CCTGCCTGCC GGATTATATC CATTGCTGGC ATTAAGCGGC GGTATTTTAA TTTTTGCTTT AACCACGGCG CTGGAAGGCA GCGGTATTCT GGCTGTTTAT CTGTGCGGTT TTCTGCTGGG TAATCGGCCG ATTCGCAACC GCTACGGCAT CCTGCAAAAT TTCGACGGCC TCGCCTGGCT GGCGCAAATC GCCATGTTCC TGGTGCTGGG GCTATTGGTT AACCCAAGCG ATCTGCTGCC TATTGCCATT CCGGCGCTCA TTTTGTCGGC ATGGATGATA TTCTTCGCCC GTCCCCTTTC GGTATTTGCT GGATTGCTCC CCTTCCGCGG TTTCAATCTG CGTGAGCGCG TGTTTATCAG CTGGGTAGGA TTACGCGGCG CGGTGCCAAT CATCCTGGCC GTGTTCCCGA TGATGGCGGG GCTGGAGAAT GCACGTCTGT TCTTTAATGT CGCCTTCTTT GTGGTTCTGG TTTCACTGCT CTTGCAGGGA ACATCACTCT CGTGGGCGGC TAAAAAAGCC AAAGTGGTGG TTCCGCCAGT GGGACGTCCG GTGTCACGCG TTGGCCTGGA TATTCATCCG GAAAATCCGT GGGAGCAGTT TGTTTATCAA TTGAGTGCCG ATAAATGGTG CGTGGGCGCG GCACTGCGCG ATTTGCATAT GCCAAAAGAG ACGCGTATTG CGGCACTGTT TCGTGATAAC CAGTTGCTTC ATCCTACCGG CAGCACCCGA CTGCGCGAAG GCGATGTGTT GTGTGTAATT GGTCGGGAAC GCGATCTTCC GGCGCTCGGT AAACTGTTCA GCCAGTCGCC GCCGGTCGCG CTGGATCAAC GCTTCTTTGG TGACTTCATT CTCGAAGCCA GCGCCAAATA TGCTGATGTT GCGCTGATAT ATGGCCTGGA AGACGGGCGA GAATATCGTG ATAAGCAGCA AACGCTGGGT GAAATTGTCC AGCAGTTGTT AGGCGCGGCA CCGGTTGTCG GTGACCAGGT AGAGTTTGCC GGGATGATCT GGACGGTGGC CGAGAAAGAA GATAATGAAG TGTTGAAGAT TGGCGTACGG GTGGCTGAAG AGGAAGCTGA ATCTTAA
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Protein sequence | MDATTIISLF ILGSILVTSS ILLSSFSSRL GIPILVIFLA IGMLAGVDGV GGIPFDNYPF AYMVSNLALA IILLDGGMRT QASSFRVALG PALSLATLGV LITSGLTGMM AAWLFNLDLI EGLLIGAIVG STDAAAVFSL LGGKGLNERV GSTLEIESGS NDPMAVFLTI TLIAMIQQHE SSVSWMFVVD ILQQFGLGIV IGLGGGYLLL QMINRIALPA GLYPLLALSG GILIFALTTA LEGSGILAVY LCGFLLGNRP IRNRYGILQN FDGLAWLAQI AMFLVLGLLV NPSDLLPIAI PALILSAWMI FFARPLSVFA GLLPFRGFNL RERVFISWVG LRGAVPIILA VFPMMAGLEN ARLFFNVAFF VVLVSLLLQG TSLSWAAKKA KVVVPPVGRP VSRVGLDIHP ENPWEQFVYQ LSADKWCVGA ALRDLHMPKE TRIAALFRDN QLLHPTGSTR LREGDVLCVI GRERDLPALG KLFSQSPPVA LDQRFFGDFI LEASAKYADV ALIYGLEDGR EYRDKQQTLG EIVQQLLGAA PVVGDQVEFA GMIWTVAEKE DNEVLKIGVR VAEEEAES
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