Gene SbBS512_E1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1340 
SymbolumuD 
ID6270107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1218355 
End bp1218774 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content48% 
IMG OID641725455 
ProductDNA polymerase V subunit UmuD 
Protein accessionYP_001879965 
Protein GI187732911 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000577771 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTA TCAAGCCTGC GGATCTCCGC GAAATTGTGA CTTTTCCGCT ATTTAGCGAT 
CTTGTTCAGT GTGGCTTTCC TTCACCGGCA GCAGATTACG TCGAACAGCG CATCGATCTG
AATCAACTGT TGATCCAGCA TCCCAGCGCG ACTTACTTCG TCAAAGCAAG TGGTGATTCT
ATGATTGATG GTGGAATTAG TGACGGTGAT TTACTGATTG TCGATAGCGC TATTACCGCC
AGCCATGGTG ATATTGTCAT CGCTGCTGTT GACGGCGAGT TTACGGTGAA AAAATTGCAA
CTACGCCCGA CGGTACAGCT TATTCCCATG AACAGTGCGT ACTCGCCCAT TACCATCAGT
AGCGAAGATA CGCTGGATGT CTTTGGTGTG GTGATCCACG TCGTTAAGGC GATGCGCTGA
 
Protein sequence
MLFIKPADLR EIVTFPLFSD LVQCGFPSPA ADYVEQRIDL NQLLIQHPSA TYFVKASGDS 
MIDGGISDGD LLIVDSAITA SHGDIVIAAV DGEFTVKKLQ LRPTVQLIPM NSAYSPITIS
SEDTLDVFGV VIHVVKAMR