Gene SbBS512_E1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1337 
Symbol 
ID6273176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1217280 
End bp1217552 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content46% 
IMG OID641725453 
Productputative IS1 encoded protein 
Protein accessionYP_001879964 
Protein GI187733729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000127234 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCATGTT TTACGGCAAT GAGAGCAGAG ATAGCGCTGA TGTCCGGCAG TGCTTTTGCC 
GTTACGCACC ACGCCTTCAG TAGCGGAGCA GGAAGGACAT CTGATGGAAA TGGAAGCCAC
GCAAGCACCT TAAAATCACC ATCATACACT AAATCAGTAA GTTGGCAGCA TTACCAGTTA
CCTGTTGATA ATAAGGTATC GGGTAACTCT CATTATGACA GAGCGCTTTC AAAAACAGGG
CTACGAAATG GCGAGCATCC AGACGTATAT TAA
 
Protein sequence
MPCFTAMRAE IALMSGSAFA VTHHAFSSGA GRTSDGNGSH ASTLKSPSYT KSVSWQHYQL 
PVDNKVSGNS HYDRALSKTG LRNGEHPDVY