Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1304 |
Symbol | potA |
ID | 6271341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1189367 |
End bp | 1190503 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641725423 |
Product | putrescine/spermidine ABC transporter ATPase protein |
Protein accession | YP_001879934 |
Protein GI | 187733204 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAGA GTAAAAAATT GAATAAACAA CCGAGTTCGC TTTCACCGCT GGTGCAATTG GCGGGAATTC GCAAATGCTT TGATGGTAAA GAGGTCATTC CCCAGCTGGA TCTGACTATC AACAATGGCG AGTTCCTCAC GCTGCTTGGC CCTTCTGGCT GCGGTAAAAC AACCGTTCTT CGCCTGATTG CAGGTCTGGA AACTGTTGAT TCCGGACGCA TCATGCTGGA TAACGAGGAC ATCACCCACG TTCCGGCGGA AAACCGCTAT GTGAACACTG TTTTCCAAAG CTACGCACTT TTCCCCCACA TGACCGTGTT CGAAAATGTG GCCTTTGGGT TGCGCATGCA AAAAACCCCC GCTGCTGAAA TTACGCCCCG CGTGATGGAA GCCCTGCGGA TGGTGCAACT GGAAACCTTC GCTCAACGTA AACCGCATCA GCTCTCTGGT GGTCAACAGC AACGCGTCGC CATTGCTCGC GCGGTGGTTA ACAAGCCTCG TCTGTTGTTG CTGGATGAGT CGCTCTCAGC GCTGGATTAC AAACTGCGTA AGCAAATGCA GAACGAGCTG AAAGCGTTAC AGCGTAAGCT TGGCATTACA TTCGTCTTCG TGACTCACGA CCAGGAAGAA GCACTCACCA TGTCAGACAG GATTGTGGTG ATGCGCGAGG GTCGCATTGA GCAAGACGGC ACGCCGCGTG AAATCTACGA AGAGCCGAAA AACCTGTTTG TTGCCGGCTT CATTGGCGAA ATTAATATGT TTAACGCCAC GGTGATCGAG CGACTCGACG AGCAGCGCGT ACGCGCCAAC GTTGAAGGCC GCGAATGTAA TATCTACGTT AACTTCGCCG TTGAACCGGG GCAAAAACTG CATGTTCTGC TGCGCCCGGA AGACTTACGT GTTGAAGAGA TTAACGACGA CAACCACGCT GAAGGGCTGA TTGGTTACGT TCGTGAGCGT AACTACAAAG GCATGACGCT GGAGTCGGTT GTTGAACTGG AAAATGGCAA GATGGTGATG GTCAGCGAAT TCTTCAATGA AGACGATCCT GACTTTGACC ACTCTCTCGA CCAAAAAATG GCCATTAATT GGGTAGAAAG CTGGGAGGTC GTACTGGCTG ATGAAGAACA CAAGTAA
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Protein sequence | MGQSKKLNKQ PSSLSPLVQL AGIRKCFDGK EVIPQLDLTI NNGEFLTLLG PSGCGKTTVL RLIAGLETVD SGRIMLDNED ITHVPAENRY VNTVFQSYAL FPHMTVFENV AFGLRMQKTP AAEITPRVME ALRMVQLETF AQRKPHQLSG GQQQRVAIAR AVVNKPRLLL LDESLSALDY KLRKQMQNEL KALQRKLGIT FVFVTHDQEE ALTMSDRIVV MREGRIEQDG TPREIYEEPK NLFVAGFIGE INMFNATVIE RLDEQRVRAN VEGRECNIYV NFAVEPGQKL HVLLRPEDLR VEEINDDNHA EGLIGYVRER NYKGMTLESV VELENGKMVM VSEFFNEDDP DFDHSLDQKM AINWVESWEV VLADEEHK
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