Gene SbBS512_E1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1296 
Symbol 
ID6271369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1183602 
End bp1184354 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID641725417 
Productmajor tail protein V 
Protein accessionYP_001879928 
Protein GI187731994 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAC CAAATCCCCT TGAGCCGGTA AAAGGTGCCG GTACCACTCT GTGGGTTTAC 
AACGGCAAGG GTGATGCTTA TGCAAACCCG TTGTCAGACG ATGACTGGCA GCGACTGGCT
AAGGTGAAGG ATCTGACGCC GGGCGAGATG ACGGCAGAAT CCTACGATGA TAACTACCTG
GATGATGAAG ACGCGGACTG GACCGCGACC GGGCAGGGGC AGAAATCTGC AGGTGATACC
AGTTTTACGC TGGCCTGGAA ACCGGGAGAG GAAGGCCAGA AAGGGCTTAT AGGCTGGTTT
GAAAGCGGCG ATGTCCGGGC CTATAAAATC CGTTTTCCGA ATGGCACGGT GGATGTGTTT
CGTGGCTGGG TCAGCAGTAT CGGTAAGGCC GTGACGGCGA AAGAAGTGAT CACCCGCACG
GTGAAAGTCA CTAACGTGGG TAAACCTTCT GTAGCGGAAG AACGCAGCAA AATTACGCCG
GTCAGTGCGA TTAAGGTGAC GCCGACATCC GGTACGGTGG CAAAAGGGAA AACAACCACC
CTGACGGTTT CTTTTGAGCC GGAAAGTGCA ACCGACAAGA CGTTCAGAGC GGTTTCCGCC
GATCCGTCGA AAGCCACCAT TAGTGTGAAA GATATGACAA TTACGGTAAA CGGCGTGGCG
ACAGGTAAGG TGCAGATCCC TGTGGTGAGC GGAAATGGTC AGTTCGCCGC AGTGGCTGAA
GTCACCGTTA CTGAAGCGGG CGCTGCAGGG TAA
 
Protein sequence
MATPNPLEPV KGAGTTLWVY NGKGDAYANP LSDDDWQRLA KVKDLTPGEM TAESYDDNYL 
DDEDADWTAT GQGQKSAGDT SFTLAWKPGE EGQKGLIGWF ESGDVRAYKI RFPNGTVDVF
RGWVSSIGKA VTAKEVITRT VKVTNVGKPS VAEERSKITP VSAIKVTPTS GTVAKGKTTT
LTVSFEPESA TDKTFRAVSA DPSKATISVK DMTITVNGVA TGKVQIPVVS GNGQFAAVAE
VTVTEAGAAG