Gene SbBS512_E1286 details

Gene Information

• Locus tag: SbBS512_E1286
• ID: 6273229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1175200
• End bp: 1177128
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641725407
• Product: phage terminase large subunit (GpA)
• Protein accession: YP_001879918
• Protein GI: 187731821
• COG category: [R] General function prediction only
• COG ID: [COG5525] Bacteriophage tail assembly protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATAT CAGAGCAACA ACTGAATAAT ATGATGAGTG CTGTCACAAC AGCATTACAG 
CCCCTGATAA GGGCATTGCC GGTGACGCCA GTTGAATGGG CTGATCAAAA TTATTATCTG 
CCTAAAGAAT CTTCATATGG TGAGGGAGAA TGGAAAACGC TGCCGTTCCA GGTCGCCATT 
ATGAACTGTA TGGGTAACGA CCAGGTTCGC ACGGTTAACC TGATTAAATC TGCCCGTGTT 
GGCTATACAA AGATGTTGCT GGGGGTGGTC GGGTATTTTA TTGAGCATAA ATCACGAAAC 
AGTCTGCTTT TTCAGCCCAC GGATTCTGCC GCTGAAGATT TTATGAAGTC TCACGTGGAG 
GCGACGATTC GGGATGTGCC ATGCCTGAAA GACCTTTCCC CATGGCTGGG TCGTAAACAT 
CGTGATAATA CCCTCACGCT GAAACGTTTT TCATCGGGCG TGGGCTTCTG GTGCCTGGGC 
GGGGCTGCCG CTAAAAACTA CCGTGAAAAA TCCGTGGACG TGGTCTGCTA TGACGAACTT 
TCCTCGTTCG AACCGGATGT CGAAAAAGAG GGTTCGCCAA CCCTGCTGGG GGATAAACGT 
ATTGAGGGCT CTGTATGGCC CAAATCCATT CGCGGCTCGA CGCCTAAAAT CAAAGGCACC 
TGCCAGATCG AAAAAGCGGC CAACGAGTCG GCGCATTTTA TGCGTTTTTA TGTGCCCTGC 
CCACACTGTG GGGAGGAGCA GTATCTGAAA TTTGGCGATG AGTCCACGCC TTTTGGGCTT 
AAATGGGAGA AGGACAGTCC CGAAAGTGTT TTCTACCTCT GTGAACATCA TGGCTGCGTG 
ATCCATCAGT CTGAACTGGA CCAGAGCAAC GGGCGGTGGA TCTGTGAAAA CACGGGCATG 
TGGACCCGTG ACGGTCTGAC GTTTTTCAGC GCTGCGGGTA ATGAAATTCC GCCGCCGCGC 
TCCATCACGT TCCATATCTG GACGGCGTAC AGTCCGTTTA CCACCTGGGT ACAGATAGTC 
TATGACTGGC TGGATGCACT GAAAGATCCC AACGGCCTGA AAACCTTTGT GAACACCACG 
CTGGGCGAGA CCTGGGAAGA AGCCGTGGGC GAAAAACTCG ATCACCAGGT ACTGATGGAT 
AAGGTCGTGC ATTACACGGC GGCGGTACCT GCCCGGGTGG TTTATCTGAC GGCGGGCATT 
GACTCGCAGC GAAACCGTTT TGAGATGTAT GTCTGGGGAT GGGCACCGGG AGAGGAAGCT 
TTTCTGGTGG ATAAAATCAT CATTATGGGC CGTCCCGATG AGGAAGAGAC GCTGTTACGT 
GTGGATGCGG CGATCAACAA AAAATACTGC CATGCAGACG GAACCGAAAT GACCATTTCC 
CGTGTCTGCT GGGACACCGG GGGGATCGAT GGTGAAATTG TCTATCAGAG GTCAAAAAAA 
CACGGTGTTT TCCGGGTGCT GCCGGTAAAA GGCGCATCTG TCTATGGCAA GCCGGTGATC 
ACCATGCCGA AAACCCGCAA TCAGCGGGGC GTGTATCTGT GTGAAGTGGG GACGGACACC 
GCAAAAGAAA TTCTCTATGC CCGTATGAAA GCCGATCCCA CGCCTGCGGA TGAAGCCACG 
TCGTATGCCA TCCGTTTTCC TGATGATCCG GAGATTTTTT CGCAGACAGA GGCGCAGCAA 
CTGGTCGCGG AAGAGCTTGT GGAGAAGTGG GAAAAAGGAA AGATGCGTCT GCTGTGGGAT 
AACAAAAAGC GGCGTAACGA AGCGCTGGAC TGCCTGGTGT ATGCCTACGC GGCATTACGT 
GTGTCCGTGC AACGCTGGCA GCTTGATCTG GCTGTACTGG CAAAATCCCG GGAAGAAGAG 
ACGACCCGGC CAACCCTTAA AGAACTGGCA GCGAAGCTGT CCGGAGGAGT GAATGGTTAC 
AGTCGCTGA 

 

Protein sequence

MNISEQQLNN MMSAVTTALQ PLIRALPVTP VEWADQNYYL PKESSYGEGE WKTLPFQVAI 
MNCMGNDQVR TVNLIKSARV GYTKMLLGVV GYFIEHKSRN SLLFQPTDSA AEDFMKSHVE 
ATIRDVPCLK DLSPWLGRKH RDNTLTLKRF SSGVGFWCLG GAAAKNYREK SVDVVCYDEL 
SSFEPDVEKE GSPTLLGDKR IEGSVWPKSI RGSTPKIKGT CQIEKAANES AHFMRFYVPC 
PHCGEEQYLK FGDESTPFGL KWEKDSPESV FYLCEHHGCV IHQSELDQSN GRWICENTGM 
WTRDGLTFFS AAGNEIPPPR SITFHIWTAY SPFTTWVQIV YDWLDALKDP NGLKTFVNTT 
LGETWEEAVG EKLDHQVLMD KVVHYTAAVP ARVVYLTAGI DSQRNRFEMY VWGWAPGEEA 
FLVDKIIIMG RPDEEETLLR VDAAINKKYC HADGTEMTIS RVCWDTGGID GEIVYQRSKK 
HGVFRVLPVK GASVYGKPVI TMPKTRNQRG VYLCEVGTDT AKEILYARMK ADPTPADEAT 
SYAIRFPDDP EIFSQTEAQQ LVAEELVEKW EKGKMRLLWD NKKRRNEALD CLVYAYAALR 
VSVQRWQLDL AVLAKSREEE TTRPTLKELA AKLSGGVNGY SR