Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1282 |
Symbol | |
ID | 6271151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1170326 |
End bp | 1170745 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641725403 |
Product | putative Prophage Qin DNA packaging protein NU1 homolog |
Protein accession | YP_001879914 |
Protein GI | 187730845 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4220] Phage DNA packaging protein, Nu1 subunit of terminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTACGC AGACTGAAGT TGCCAGGCAT TTAAGTCTGA CCGATCGCCA GCTTCGCAGA TTGCAGAAAT TGCCGGGTGC CCCGATATCG AATAAGCGAG GGCAACTGGA TCTGGATGCC TGGCGCGATT TTTACATATC GTATCTGAGA AGAAGTAAAA ACGATGTGCC TGATGGCGAT AGCGAAGACG ACTATGAGGA AAAATTGCTT ATTGCCAGAT GGGAACTGAC AGCAGAACAG GCTGTTACAC AGCAGTTAAA AAATGAGGTG TCAAAAGGAA AACTTATTGA CACCGGGTTC TGTATTTTTG CCCTCAGCAA GCTGGCAATG GCGTTATCCA GTACTCTTGA TTCCATCCCT TTATCCATGC AACGACAGTT TCCTGGTAAG CGTAAACTGA CCGCCGTATG TAGCCATTAA
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Protein sequence | MATQTEVARH LSLTDRQLRR LQKLPGAPIS NKRGQLDLDA WRDFYISYLR RSKNDVPDGD SEDDYEEKLL IARWELTAEQ AVTQQLKNEV SKGKLIDTGF CIFALSKLAM ALSSTLDSIP LSMQRQFPGK RKLTAVCSH
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