Gene SbBS512_E1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1282 
Symbol 
ID6271151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1170326 
End bp1170745 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID641725403 
Productputative Prophage Qin DNA packaging protein NU1 homolog 
Protein accessionYP_001879914 
Protein GI187730845 
COG category[L] Replication, recombination and repair 
COG ID[COG4220] Phage DNA packaging protein, Nu1 subunit of terminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTACGC AGACTGAAGT TGCCAGGCAT TTAAGTCTGA CCGATCGCCA GCTTCGCAGA 
TTGCAGAAAT TGCCGGGTGC CCCGATATCG AATAAGCGAG GGCAACTGGA TCTGGATGCC
TGGCGCGATT TTTACATATC GTATCTGAGA AGAAGTAAAA ACGATGTGCC TGATGGCGAT
AGCGAAGACG ACTATGAGGA AAAATTGCTT ATTGCCAGAT GGGAACTGAC AGCAGAACAG
GCTGTTACAC AGCAGTTAAA AAATGAGGTG TCAAAAGGAA AACTTATTGA CACCGGGTTC
TGTATTTTTG CCCTCAGCAA GCTGGCAATG GCGTTATCCA GTACTCTTGA TTCCATCCCT
TTATCCATGC AACGACAGTT TCCTGGTAAG CGTAAACTGA CCGCCGTATG TAGCCATTAA
 
Protein sequence
MATQTEVARH LSLTDRQLRR LQKLPGAPIS NKRGQLDLDA WRDFYISYLR RSKNDVPDGD 
SEDDYEEKLL IARWELTAEQ AVTQQLKNEV SKGKLIDTGF CIFALSKLAM ALSSTLDSIP
LSMQRQFPGK RKLTAVCSH