Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1276 |
Symbol | |
ID | 6268664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1165150 |
End bp | 1166325 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641725398 |
Product | transposase |
Protein accession | YP_001879909 |
Protein GI | 187733508 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGAGC TGTTGCTACA CCCCGGTATT TCCACCACGG AGGCCAGCAT GAACAACAAT AACACATTGT ACGTCGGGTT AGATGTTCAC AAAGAATCGA TTACTGTCGC TTATGCTATC AATTCAGAAC CTGTTGAACT GATGGGTAAA ATTGGCACAT CACCTACTGA TATTCAGAAT CTTTGTAAAC GTCTCAGGTC AAAGTCATCG CAGGTCAGTA TCGTTTATGA AGCGGGGCCC TGTGGTTATG GACTTTATCG TCGGCTGGTG AAATCCGGTT TTGACTGCAT GGTCTGCGCC CCCTCACTTA TCTCGAAAAA ACCGGGGGAG CGGGTTAAAA CCGATCGCCG TGATGCCATC AGACTTGTGC GTTCACTGCG TGCAGGAGAT CTTTCTGCTG TCTACGTACC CGGCATTGAA GATGAGGCAT TCCGGGATTT GGCCCGGGCA TGGGCATCTG CCCGCGATGA TTTACGGCAT GCAAGGCAAC GTCTGAAATC GTTTCTTCTG GTTCATGGGG TCCATTATGT CGGGCGAGCA GATTGGGGCC CTGCACACCG ACGCTGGCTC AGCAAATACT CATTCGAAAG TCCCTGGCGA CAATTAGCTT TTGACGAACA CCGTCGTACA ATAGAAGACC GGCAGGCACA ATGTGAACGG CTGGAATCCG CCCTGAAGGA GGCCGTTACC GAATGGAGGC TGTATCCGGT AGTAGAGGCG CTGCAAGCCA TGCGAGGGAT TCAGTTTATT ACTGCGGTTG GATTAATTTC TGAACTGGGT GATCTGACCC GTTTTGAACA TCCACGACAA CTGATGTCAT GGTTTGGTAT CACGCCATCA GAATATTCAT CGGGTGGAAG CAGACATCAG GGCAGCATTA CCAAAGCCGG AAACAGCTAT GCCAGAAAGC TATTGGTCGA GGCAGCGTGG AGTTACCGTC ATCCGGCACG CATCAGTCCG GCAATACAAA AAAGGCAGGA AAATTTACCC CGCCCCGTCA TTGACAGAGC ATGGGATGCT CAACTCAGGC TTTGTAAGAG GTATCGAAAA CTTCAGGCCA AAGGAAAGAA TGTCAATATT ACAATTGTTG CTGTTGCACG TGAGCTGGCG GGTTTTATCT GGGATATGGG CCGAATAGCA ATGTCTGTCG CACAACAACC ACAATGTCAC AAATAA
|
Protein sequence | MGELLLHPGI STTEASMNNN NTLYVGLDVH KESITVAYAI NSEPVELMGK IGTSPTDIQN LCKRLRSKSS QVSIVYEAGP CGYGLYRRLV KSGFDCMVCA PSLISKKPGE RVKTDRRDAI RLVRSLRAGD LSAVYVPGIE DEAFRDLARA WASARDDLRH ARQRLKSFLL VHGVHYVGRA DWGPAHRRWL SKYSFESPWR QLAFDEHRRT IEDRQAQCER LESALKEAVT EWRLYPVVEA LQAMRGIQFI TAVGLISELG DLTRFEHPRQ LMSWFGITPS EYSSGGSRHQ GSITKAGNSY ARKLLVEAAW SYRHPARISP AIQKRQENLP RPVIDRAWDA QLRLCKRYRK LQAKGKNVNI TIVAVARELA GFIWDMGRIA MSVAQQPQCH K
|
| |