Gene SbBS512_E1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1270 
Symbol 
ID6272437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1162243 
End bp1162776 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID641725392 
Productphage lysozyme 
Protein accessionYP_001879903 
Protein GI187733126 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.209647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA AAATCAAATA CGGCCTGTCG GCTGCCGTTC TGGCGCTGAT TGCCGCAGGT 
GCGCCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACG
GCATACCGTG ATGGCGCGGG TATCTGGACC ATCTGCCGCG GTGCCATCCT GGTGGATAGT
AAACCTGTCG TCCCGGGCAT GAAGTTGTCG AAGGAAAAAT GCGACCAGGT CAACGCCATT
GAGCGTGATA AGGCGCTGGC ATGGGTGGAG CGCAATATTA AAGTGCCGCT GACCGAACCC
CAGAAAGCGG GTATCGCGTC ATTTTGTCCC TATAACATTG GCCCCGGTAA GTGTTTCCCG
TCGACGTTTT ACAGACGGAT TAATGCTGGT GACCGCAGGG GAGCATGCGA AGCGATTCGC
TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATCCGCT CAAATAATTG CTACGGTCAG
GTATCCCGGC GAGACCAGGA AAGTGCGCTG GCGTGCTGGG ACATCGACAG ATAA
 
Protein sequence
MNTKIKYGLS AAVLALIAAG APAPEILDQF LDEKEGNHTT AYRDGAGIWT ICRGAILVDS 
KPVVPGMKLS KEKCDQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP
STFYRRINAG DRRGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL ACWDIDR