Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1270 |
Symbol | |
ID | 6272437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1162243 |
End bp | 1162776 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725392 |
Product | phage lysozyme |
Protein accession | YP_001879903 |
Protein GI | 187733126 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.209647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCA AAATCAAATA CGGCCTGTCG GCTGCCGTTC TGGCGCTGAT TGCCGCAGGT GCGCCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACG GCATACCGTG ATGGCGCGGG TATCTGGACC ATCTGCCGCG GTGCCATCCT GGTGGATAGT AAACCTGTCG TCCCGGGCAT GAAGTTGTCG AAGGAAAAAT GCGACCAGGT CAACGCCATT GAGCGTGATA AGGCGCTGGC ATGGGTGGAG CGCAATATTA AAGTGCCGCT GACCGAACCC CAGAAAGCGG GTATCGCGTC ATTTTGTCCC TATAACATTG GCCCCGGTAA GTGTTTCCCG TCGACGTTTT ACAGACGGAT TAATGCTGGT GACCGCAGGG GAGCATGCGA AGCGATTCGC TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATCCGCT CAAATAATTG CTACGGTCAG GTATCCCGGC GAGACCAGGA AAGTGCGCTG GCGTGCTGGG ACATCGACAG ATAA
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Protein sequence | MNTKIKYGLS AAVLALIAAG APAPEILDQF LDEKEGNHTT AYRDGAGIWT ICRGAILVDS KPVVPGMKLS KEKCDQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP STFYRRINAG DRRGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL ACWDIDR
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