| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1261 |
|---|
| Symbol | |
|---|
| ID | 6268509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 1155481 |
|---|
| End bp | 1156302 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641725382 |
|---|
| Product | antitermination protein Q |
|---|
| Protein accession | YP_001879896 |
|---|
| Protein GI | 187733966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00132968 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG AAGATTTACC GAAATACTAC TCCCCAAAAT CCCCTAGCCT GACCGATGCA
TCGGCCTCAA CGTCAAAAGA TGCGCTGAGT ATCACTGATG TGATGGCCGC GCAGGGCATG
ACACAGAATC GGGCTGAGAT GGGGTTTTCT GCGTTCCTGG GGAAAATGGG CATCAGTATG
AATGACAGGG CGCGGGCAAC AGAATTACTG GCAGATTATG CACTCAGTCG GTGCGATCGT
GTGGCGGCGT TGAGAAAACT TCCGGCAGAA ATAAAACCGG TAGTGATGCG CATTATGGCT
TCGTATGCGT TTGAAGATTA TGCCCGTAGC GCGGCGAGCA AAAAACAGTG CCCCTGCTGT
CACGGAAAAA AATTTATTGA AAGCGAGGTT TTTACAAACA AGATCCAGTA TCCGGATGGT
AAGCCACCAG TGTGGGCAAA GTGCACAAAA GGCGTGTATC CGTCTTACTG GGAAGAATGG
AAAAAAGTCA GGGAGGTGGT AAAAGTTGCC TGTCCGGAGT GTGGCGGAAA GGGTGAGGTT
TCCACCGCCT GTAAGGATTG CCGTGGGCGT GGTGTCGCCA TTCATCGTGA AGAGTCGGTA
AAACGTGGTA TGCCTGTTAT CAGAGACTGC CAGCGTTGTG GTGGTCGTGG CTGTGAAAGA
CTACCATCAA CGGAGGCATT TAATGCCATA TGCAAAGTGA CGAGTGCTAT CACGCTTGAT
ACGTGGAAAA AATCAGTGAA ACGCTTTTAC GATACGTTGG TGGTTCGGTT TGACATTGAA
GAGGCATGGG CGGAGCGGCA GTTAAAGAGG GTAACGCGAT AG
|
|---|
| Protein sequence | MKLEDLPKYY SPKSPSLTDA SASTSKDALS ITDVMAAQGM TQNRAEMGFS AFLGKMGISM
NDRARATELL ADYALSRCDR VAALRKLPAE IKPVVMRIMA SYAFEDYARS AASKKQCPCC
HGKKFIESEV FTNKIQYPDG KPPVWAKCTK GVYPSYWEEW KKVREVVKVA CPECGGKGEV
STACKDCRGR GVAIHREESV KRGMPVIRDC QRCGGRGCER LPSTEAFNAI CKVTSAITLD
TWKKSVKRFY DTLVVRFDIE EAWAERQLKR VTR
|
|---|
| |