Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1250 |
Symbol | |
ID | 6268988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1148166 |
End bp | 1148873 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641725375 |
Product | hypothetical protein |
Protein accession | YP_001879889 |
Protein GI | 187732840 |
COG category | [S] Function unknown |
COG ID | [COG3646] Uncharacterized phage-encoded protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000878472 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCG CAATTTTTAA CGGCAAAGCA TCCATGACCA GCGTTGAGAT CGCAGAGCTG GTGGGAAGCC GACCAGATAG TGTTAAGAGA ACTATTGAAA CACTGGCTAA AAAGGGAATC ATCCAATTTC CACAGACTGT GGAAATTGAG AATAAACAAT CACTTGGGCC TCGCCGATTT TCTAGCGCGT ATGTATTCGA AGGTGAACGA GGTAAGCGCG ACAGCATCAT TGTCGTCGCA CAGCTCTGTC CTGAATTCAC AGCTCGCCTG GTAGATCGCT GGCGCGAACT GGAAGAACAG ATCCGTAAGC CAATGAGCGA AATCGAAATG GTTGCCGCGA TGGCTCTTGA AGCCGTTCGC CAACAGAAAC GGATCACTCA GGTGGAAGAA AAAGTCAGCC ACGTTGCTGA AACAGTCGAG CAAATTAAAA AGGGCACTAT TCGTGAGGGC TATGCCGGAT ATCGCCAACT GAAAGCAAAA ACCGGTTTGT CAGATGATAA ATGCCGCAAT CTGGTGAACG CCTATCAAAT TCCTACAGAC ACCCATGAGT TCATGACGCC GGACAGATTG TTGCCACGTC GCGCAATTGT TGCTGTGGAA CCGTTTATGG CTGCTTTTTA TCGGGTTATG GAGGAAGCAG AACCGCGAGG GACTCGCTGG TATCACCCGA AAATGGGGTT ATTTCAGGTT ATTGGTTGGC AGCGGTGA
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Protein sequence | MNTAIFNGKA SMTSVEIAEL VGSRPDSVKR TIETLAKKGI IQFPQTVEIE NKQSLGPRRF SSAYVFEGER GKRDSIIVVA QLCPEFTARL VDRWRELEEQ IRKPMSEIEM VAAMALEAVR QQKRITQVEE KVSHVAETVE QIKKGTIREG YAGYRQLKAK TGLSDDKCRN LVNAYQIPTD THEFMTPDRL LPRRAIVAVE PFMAAFYRVM EEAEPRGTRW YHPKMGLFQV IGWQR
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