Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1239 |
Symbol | |
ID | 6272332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1140687 |
End bp | 1141013 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641725365 |
Product | IS1203 transposase orfA |
Protein accession | YP_001879879 |
Protein GI | 187733866 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.872815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA ATACTCGTTT TTCCCCCGAA GTCCGTCAAC GGGCAGTCCG TATGGTTCTG GAAAGTCAGG GCGAATATGA CTCACAATGG GCGACAATTT GTTCCATTGC TCCAAAGATT GGCTGTACGC CGGAGACTCT GCGTGTCTGG GTTCGCCAGC ATGAGCGGGA TACCGGGGGC GGTGATGGAG GGCTCACCAC CGCTGAACGT CAGCGTCTGA AAGAGCTGGA GCGTGAAAAT CGTGAACTGC GCCGCAGTAA CGATATCCTT CGCCAGGCTT CCGCTTATTT TGCGAAGGCG GAGTTCGACC GCCTCTGGAA AAAATGA
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Protein sequence | MTKNTRFSPE VRQRAVRMVL ESQGEYDSQW ATICSIAPKI GCTPETLRVW VRQHERDTGG GDGGLTTAER QRLKELEREN RELRRSNDIL RQASAYFAKA EFDRLWKK
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