Gene SbBS512_E1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1204 
Symbol 
ID6269111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp1111744 
End bp1112748 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content42% 
IMG OID641725335 
ProductNAD dependent epimerase/dehydratase family 
Protein accessionYP_001879849 
Protein GI187732343 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.573318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC TGGTTACGGG AGCTGCTGGC TTTATCGGTT TCTATGTAAG TAAACGGCTT 
CTTGCAGCTG GTCATCAGGT TGTAGGCATT GACAACTTAA ATGATTATTA CGATGTCAAC 
CTCAAACAAG CACGACTTGA TTTACTCAAG CACGACAATT TCAGTTTTTA TAAAATTGAC 
CTGGCCGATC GCGAGAAAAT GGCGGCACTG TTTGCAGACG AGCGGTTCGA TCGCGTAATA 
AACCTCGCTG CGCAAGCCGG TGTACGTTAC TCCCTTGAAA ATCCCAATGC ATATGCAGAT 
GCAAACCTGA TTGGATTCCT GAACATACTG GAAGGATGTC GCCATAATAA TGTTCAGCAT 
CTACTTTACG CTTCCTCCAG TTCTGTTTAT GGCATGAACC GCAAGATGCC TTTCTCTACA 
GATGACTCTG TAGATCATCC TGTTTCGCTT TATGCAGCAA CTAAAAAAGC GAATGAACTC 
ATGGCCCATA CGTATTCTCA TTTGTATGGC TTACCGACCA CAGGGCTGCG TTTCTTTACG 
GTTTATGGTC CATGGGGACG TCCGGATATG GCATTATTTA AATTTACTAA AGCCATGCTG 
GAAGGTAAAA GCATTGATGT TTACAACTTC GGCAAAATGA AGCGTGACTT TACTTATATT 
GATGATATTG CCGAAGCTAT TATTCGCTTA CAGGATGTTA TTCCAGAAAA AGATCCACAG 
TGGACTGTAG AAACTGGATC GCCTGCAACA AGTTCAGCAC CATATCGTGT CTATAACATT 
GGTAATAGTT CGCCTGTGGA GTTGATGGAC TATATCAATG CTTTAGAAGA GGCTCTGGGT 
ATTGAAGCCA ACAAGAATAT GATGCCTCTC CAACCCGGTG ATGTACTGGA AACCAGTGCT 
GATACAAAAG CACTGTATGA CGTAATAGGA TTCAAACCTG AAACGTCAGT TAAAGAGGGG 
GTAAAGAACT TTGTAGAATG GTATCGTAAC TTCTATAAAG TTTGA
 
Protein sequence
MKFLVTGAAG FIGFYVSKRL LAAGHQVVGI DNLNDYYDVN LKQARLDLLK HDNFSFYKID 
LADREKMAAL FADERFDRVI NLAAQAGVRY SLENPNAYAD ANLIGFLNIL EGCRHNNVQH 
LLYASSSSVY GMNRKMPFST DDSVDHPVSL YAATKKANEL MAHTYSHLYG LPTTGLRFFT 
VYGPWGRPDM ALFKFTKAML EGKSIDVYNF GKMKRDFTYI DDIAEAIIRL QDVIPEKDPQ 
WTVETGSPAT SSAPYRVYNI GNSSPVELMD YINALEEALG IEANKNMMPL QPGDVLETSA 
DTKALYDVIG FKPETSVKEG VKNFVEWYRN FYKV