Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1197 |
Symbol | |
ID | 6270580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1103246 |
End bp | 1104463 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641725328 |
Product | Wzx |
Protein accession | YP_001879842 |
Protein GI | 187733398 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.905565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA ATATAATATA TCTTTTTTTT GTGCAGGGCA CAAACTATCT GTTTCCACTA ATAACATTGC CATATTTGAT TCGCATGTTA GGGAGTAACT CTTTTGGCAT ATATGCAATG ATACTTGCTG GAATACAGTA TGTTAATATA ATTGTTGATT TCGGTTTTAA CTTCACTGCT ACAAAACTAA TCTCAATATA TAAAAATAAT GAAAATGAGA AAAATAAAAT ATTCACTGCA ACAATTATAA TTAAATTTAT TTTATTCTGT CTTTGCCTTT CTGTTCTATT ATTATTATCT TTGGTATTAG AACAGGGAAA ATATATACAA TATATAATAA TAGGTTCTAT CGCTGTAATT GGGAATATGC TCTTACCTGT TTGGTTTTTT CAGGGAATAG AGAGAATGAG TAAGATTGCA TTATTTTCTA CTTTATCTAA ACTTTCATCA TTACTATTTA TTTTTTTTAC GGTAAAATCA TCAGATGATG TTGGACTAGC TATAGCAAGT TACTCATTAG GCTTGCTATT TACTGGGCTA TTATCAGTTT ATGTTATCTT TCATTATAAA TATGTTAAAT TTACAAAGGT GAGTTTAAAG TTTATAATCA AATTAGCTAA AGATAGTGTT GATATGTTTA TATCAAACAT TACTGTTAGT TTTTATACTA CACTTAATAC AATTTTAGTT GGTGCTATTG CTGGCCCTGC AACAGCAGGT TACTTTTCGG CTGCGGATAA ATTAAGGATA GCGGTTCAAG GACTTTTAAC ACCTTTGCAG CAAGCAATTT TTCCAAGAGT TACAAGTTTG ATTAATAATG ACTATAAGCT GAATGATGTA TTAAAAACAT TTGGCTATAA AATGATTGGC TTTGGATTTT TTCTATCACT AAGCATTGCG ATCATTGGAG TTCCATTATC CGAGTGGTAT TTTGGTAACA ATAATGCAAT ATCATCAAAA ATACTTTTAA TACTTAGTCC ACTTCCTTTT GTCGTGTCTA TTGGTATTGT ATTCGGGCAA TGGTGGCTAA TTACCACTAA TAGGACAAGA ATAATCAGAA AAGTATATTT TAATTTAAGC ATGCTACATG TTTTTATTGC TTATTTCTTA ATTAAGCACA TTCCGAATTA TGGCGTAGCA ATATCAATAG TTTTTACTGA AACTATCATA TCATTATTAC TTACAATTTT TGCTATAAAA AACTCAGTTA ATCATTGA
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Protein sequence | MKKNIIYLFF VQGTNYLFPL ITLPYLIRML GSNSFGIYAM ILAGIQYVNI IVDFGFNFTA TKLISIYKNN ENEKNKIFTA TIIIKFILFC LCLSVLLLLS LVLEQGKYIQ YIIIGSIAVI GNMLLPVWFF QGIERMSKIA LFSTLSKLSS LLFIFFTVKS SDDVGLAIAS YSLGLLFTGL LSVYVIFHYK YVKFTKVSLK FIIKLAKDSV DMFISNITVS FYTTLNTILV GAIAGPATAG YFSAADKLRI AVQGLLTPLQ QAIFPRVTSL INNDYKLNDV LKTFGYKMIG FGFFLSLSIA IIGVPLSEWY FGNNNAISSK ILLILSPLPF VVSIGIVFGQ WWLITTNRTR IIRKVYFNLS MLHVFIAYFL IKHIPNYGVA ISIVFTETII SLLLTIFAIK NSVNH
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