Gene SbBS512_E1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1197 
Symbol 
ID6270580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1103246 
End bp1104463 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content29% 
IMG OID641725328 
ProductWzx 
Protein accessionYP_001879842 
Protein GI187733398 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.905565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATATAATATA TCTTTTTTTT GTGCAGGGCA CAAACTATCT GTTTCCACTA 
ATAACATTGC CATATTTGAT TCGCATGTTA GGGAGTAACT CTTTTGGCAT ATATGCAATG
ATACTTGCTG GAATACAGTA TGTTAATATA ATTGTTGATT TCGGTTTTAA CTTCACTGCT
ACAAAACTAA TCTCAATATA TAAAAATAAT GAAAATGAGA AAAATAAAAT ATTCACTGCA
ACAATTATAA TTAAATTTAT TTTATTCTGT CTTTGCCTTT CTGTTCTATT ATTATTATCT
TTGGTATTAG AACAGGGAAA ATATATACAA TATATAATAA TAGGTTCTAT CGCTGTAATT
GGGAATATGC TCTTACCTGT TTGGTTTTTT CAGGGAATAG AGAGAATGAG TAAGATTGCA
TTATTTTCTA CTTTATCTAA ACTTTCATCA TTACTATTTA TTTTTTTTAC GGTAAAATCA
TCAGATGATG TTGGACTAGC TATAGCAAGT TACTCATTAG GCTTGCTATT TACTGGGCTA
TTATCAGTTT ATGTTATCTT TCATTATAAA TATGTTAAAT TTACAAAGGT GAGTTTAAAG
TTTATAATCA AATTAGCTAA AGATAGTGTT GATATGTTTA TATCAAACAT TACTGTTAGT
TTTTATACTA CACTTAATAC AATTTTAGTT GGTGCTATTG CTGGCCCTGC AACAGCAGGT
TACTTTTCGG CTGCGGATAA ATTAAGGATA GCGGTTCAAG GACTTTTAAC ACCTTTGCAG
CAAGCAATTT TTCCAAGAGT TACAAGTTTG ATTAATAATG ACTATAAGCT GAATGATGTA
TTAAAAACAT TTGGCTATAA AATGATTGGC TTTGGATTTT TTCTATCACT AAGCATTGCG
ATCATTGGAG TTCCATTATC CGAGTGGTAT TTTGGTAACA ATAATGCAAT ATCATCAAAA
ATACTTTTAA TACTTAGTCC ACTTCCTTTT GTCGTGTCTA TTGGTATTGT ATTCGGGCAA
TGGTGGCTAA TTACCACTAA TAGGACAAGA ATAATCAGAA AAGTATATTT TAATTTAAGC
ATGCTACATG TTTTTATTGC TTATTTCTTA ATTAAGCACA TTCCGAATTA TGGCGTAGCA
ATATCAATAG TTTTTACTGA AACTATCATA TCATTATTAC TTACAATTTT TGCTATAAAA
AACTCAGTTA ATCATTGA
 
Protein sequence
MKKNIIYLFF VQGTNYLFPL ITLPYLIRML GSNSFGIYAM ILAGIQYVNI IVDFGFNFTA 
TKLISIYKNN ENEKNKIFTA TIIIKFILFC LCLSVLLLLS LVLEQGKYIQ YIIIGSIAVI
GNMLLPVWFF QGIERMSKIA LFSTLSKLSS LLFIFFTVKS SDDVGLAIAS YSLGLLFTGL
LSVYVIFHYK YVKFTKVSLK FIIKLAKDSV DMFISNITVS FYTTLNTILV GAIAGPATAG
YFSAADKLRI AVQGLLTPLQ QAIFPRVTSL INNDYKLNDV LKTFGYKMIG FGFFLSLSIA
IIGVPLSEWY FGNNNAISSK ILLILSPLPF VVSIGIVFGQ WWLITTNRTR IIRKVYFNLS
MLHVFIAYFL IKHIPNYGVA ISIVFTETII SLLLTIFAIK NSVNH