Gene SbBS512_E1195 details

Gene Information

• Locus tag: SbBS512_E1195
• Symbol: rfbC
• ID: 6271083
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1101346
• End bp: 1101903
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641725327
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001879841
• Protein GI: 187731823
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAA TTAAAACTGA AATTCCTGAT GTATTAATTT TCGAACCGAA AGTTTTTGGC 
GATGAGCGTG GTTTCTTTAT GGAAAGCTTT AATCAGAAAG TTTTCGAAGA AGCTATAGGG 
CGTAAGGTTG AATTTGTTCA GGATAACCAT TCGAAGTCTA ATAAAGGCGT TTTACGCGGG 
CTGCATTATC AGTTAGAACC TTATGCGCAA GGAAAATTAG TTCGCTGTGT TGTTGGCGAG 
GTTTTTGATG TTGCTGTGGA TATTCGTAAG TCATCCCCTA CGTTTGGTAA ATGGGTTGGT 
GTGAATTTAT CTTCTGAGAA TATGCGACAG TTATGGATAC CTGAAGGATT TGCTCATGGG 
TTTTTGGTGC TGAGTGATAC TGCGGAATTT TTATATAAAA CGACGAAGTA TTACCATCCA 
GAGAGTGACA GTGGTATTAT TTGGAATGAT AAAAATATCG GAATTTGTTG GCCATTAAGA 
GAAAAACCAA TAATATCAGA AAAAGATAGC AATCTATTAC CCTTTGCTCA TTTAACTCGC 
AAACAAATAA ATTTATGA 

 

Protein sequence

MKVIKTEIPD VLIFEPKVFG DERGFFMESF NQKVFEEAIG RKVEFVQDNH SKSNKGVLRG 
LHYQLEPYAQ GKLVRCVVGE VFDVAVDIRK SSPTFGKWVG VNLSSENMRQ LWIPEGFAHG 
FLVLSDTAEF LYKTTKYYHP ESDSGIIWND KNIGICWPLR EKPIISEKDS NLLPFAHLTR 
KQINL