Gene SbBS512_E1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1192 
SymbolrfbB2 
ID6272489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1098421 
End bp1099506 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content43% 
IMG OID641725324 
ProductdTDP-glucose 4,6 dehydratase 
Protein accessionYP_001879838 
Protein GI187730265 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.428891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATAC TTGTTACTGG TGGCGCAGGA TTTATTGGTT CTGCTGTAGT TCGTCACATT 
ATAAATAATA GGCAGGATAG TGTTGTTAAT GTCGATAAAT TAACGTACGC CGGAAACCTG 
GAATCACTTG CTGATGTTTC TGATTCTGAA CGCTATGTTT TTGAACATGC GGATATTTGC 
GATGCTGCTG CAATGGCGCG GATTTTTGCT CAGCATCAGC CGGATGCAGT GATGCACCTG 
GCTGCTGAAA GCCATGTTGA CCGTTCAATT ACAGGTCCTG CGGCATTTAT TGAAACCAAT 
ATTGTTGGTA CTTATGTCCT TTTAGAAGCC GCTCGTAATT ACTGGTCTGC TCTTGATAGC 
GACAAGAAAA ATAGCTTCCG TTTTCATCAT ATTTCTACTG ACGAAGTCTA TGGTGATTTG 
CCTCATCCTG ACGAGGTAAA TATTAAAGAA GGATTACCCT TATTTACTGA GACAACAGCT 
TACGCGCCAA GCAGCCCTTA TTCCGCATCC AAAGCATCCA GCGATCATTT AGTCCGCGCG 
TGGAAACGTA CCTATGGTTT ACCGACCATT GTGACTAATT GCTCTAACAA TTATGGTCCT 
TATCATTTCC CGGAAAAATT GATTCCATTG GTTATTCTCA ATGCTCTGGA AGGTAAAGGA 
TTACCTATTT ATGGTAAAGG GGATCAAATT CGCGACTGGC TGTATGTTGA AGATCATGCG 
CGTGCGTTAT ATACCGTCGT AACCGAAGGT AAAGCGGGTG AAACTTATAA CATTGGTGGA 
CACAACGAAA AGAAAAACAT CGATGTAGTG CTCACTATTT GTGATTTGTT GGATGAGATT 
GTCCCGAAAG AGAAATCTTA CCGCGAGCAA ATTACTTATG TTACCGATCG TCCGGGACAC 
GATCGCCGTT ATGCGATTGA TGCTGAGAAG ATTGGTCGCG AATTGGGATG GAAACCACAG 
GAAACGTTTG AGAGTGGGAT TCGTAAAACG GTGGAATGGT ACCTGTCCAA TACAAAATGG 
GTTGATAATG TGAAAAGTGG TGCCTATCAA TCGTGGATTG AACAGAACTA TGAGGGCCGC 
CAGTAA
 
Protein sequence
MKILVTGGAG FIGSAVVRHI INNRQDSVVN VDKLTYAGNL ESLADVSDSE RYVFEHADIC 
DAAAMARIFA QHQPDAVMHL AAESHVDRSI TGPAAFIETN IVGTYVLLEA ARNYWSALDS 
DKKNSFRFHH ISTDEVYGDL PHPDEVNIKE GLPLFTETTA YAPSSPYSAS KASSDHLVRA 
WKRTYGLPTI VTNCSNNYGP YHFPEKLIPL VILNALEGKG LPIYGKGDQI RDWLYVEDHA 
RALYTVVTEG KAGETYNIGG HNEKKNIDVV LTICDLLDEI VPKEKSYREQ ITYVTDRPGH 
DRRYAIDAEK IGRELGWKPQ ETFESGIRKT VEWYLSNTKW VDNVKSGAYQ SWIEQNYEGR 
Q