| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1190 |
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| Symbol | gne |
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| ID | 6268982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1095918 |
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| End bp | 1096913 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641725322 |
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| Product | UDP-N-acetylglucosamine 4-epimerase |
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| Protein accession | YP_001879836 |
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| Protein GI | 187733487 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.380145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGATA ACGTTTTGCT CATAGGAGCT TCCGGATTCG TAGGAACCCG ACTACTTGAA
ACGGCAATTG CTGACTTTAA TATCAAGAAC CTGGACAAAC AGCAGAGCCA TTTTTATCCA
GCAATCACAC AGATTGGCGA TGTTCGTGAT CAACAGGCAC TCGACCAGGC GTTAGCCGGT
TTTGACACTG TTGTACTACT GGCAGCGGAA CACCGCGATG ACGTCAGCCC TACTTCTCTC
TATTATGATG TCAACGTTCA GGGTACCCGC AATGTGCTGG CGGCCATGGA AAAAAATGGC
GTTAAAAATA TCATCTTTAC CAGTTCCGTT GCTGTTTATG GTTTGAACAA ACACAACCCT
GACGAAAACC ATCCACACGA CCCTTTCAAC CACTACGGCA AAAGTAAGTG GCAGGCAGAG
GAAGTGCTGC GTGAATGGTA TAACAAAGCA CCAACAGAAC GTTCATTAAC CATCATCCGT
CCTACCGTTA TCTTCGGTGA ACGCAACCGC GGTAACGTCT ATAACTTGCT GAAACAGATC
GCTGGCGGCA AGTTTATGAT GGTGGGCGCA GGGACTAACT ATAAGTCCAT GGCTTATGTT
GGAAACATTG TTGAGTTTAT CAAGTACAAA CTGAAGAATG TTGCCGCAGG TTATGAGGTT
TATAACTATG TTGATAAGCC AGACCTGAAC ATGAACCAGT TGGTTGCTGA AGTTGAACAA
AGCCTGAACA AAAAGATCCC TTCTATGCAC TTGCCTTACC CACTAGGAAT GCTGGGTGGA
TATTGCTTTG ATATCCTGAG CAAAATTACG GGCAAAAAAT ACGCTGTCAG CTCTGTGCGC
GTGAAAAAAT TCTGCGCAAC AACACAGTTT GACGCAACGA AAGTGCATTC TTCAGGTTTT
GTGGCACCGT ATACGCTGTC GCAAGGTCTG GATCGAACTC TGCAGTATGA ATTCGTCCAT
GCCAAAAAAG ACGACATAAC GTTTGTTTCT GAGTAA
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| Protein sequence | MNDNVLLIGA SGFVGTRLLE TAIADFNIKN LDKQQSHFYP AITQIGDVRD QQALDQALAG
FDTVVLLAAE HRDDVSPTSL YYDVNVQGTR NVLAAMEKNG VKNIIFTSSV AVYGLNKHNP
DENHPHDPFN HYGKSKWQAE EVLREWYNKA PTERSLTIIR PTVIFGERNR GNVYNLLKQI
AGGKFMMVGA GTNYKSMAYV GNIVEFIKYK LKNVAAGYEV YNYVDKPDLN MNQLVAEVEQ
SLNKKIPSMH LPYPLGMLGG YCFDILSKIT GKKYAVSSVR VKKFCATTQF DATKVHSSGF
VAPYTLSQGL DRTLQYEFVH AKKDDITFVS E
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