| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1188 |
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| Symbol | wcaL |
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| ID | 6271131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1093135 |
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| End bp | 1094355 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641725320 |
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| Product | colanic acid biosynthesis glycosyl transferase WcaL |
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| Protein accession | YP_001879834 |
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| Protein GI | 187730685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCG GCTTCTTTTT ACTGAAATTT CCGCTGTCGT CGGAAACCTT CGTCCTCAAT
CAAATTACCG CGTTTATTGA TATGGGCTTT GAGGTGGAGA TTGTCGCGCT GCAAAAAGGC
GACACCCAGA ATACCCACGC GGCATGGACG AAATACAACC TTGCCGCCAG AACCCGCTGG
TTACAGGACG AACCACAAGG CAAAGTTGCG AAACTGCGCC ACCGCGCCAG CCAGACCTTA
CGCGGCATTC ATCGTAAAAA TACCTGGCAG GCGCTTAACC TCAAACGCTA TGGTGCCGAG
TCGCGGAACC TGATTTTGTC TGCCATTTGC GGCCAGGTCG CAACACCATT TTATGCCGAT
GTCTTTATCG CTCATTTTGG CCCTGCGGGG GTAACCGCAG CAAAACTACG CGAACTGGGT
GTGATTCGCG GCAAAATTGC CACCATCTTC CACGGTATTG ATATCTCCAG TCGGGAAGTG
CTCAACCACT ACACTCCCGA ATATCAACAA CTGTTTCGCC GTGGCGACCT GATGTTACCG
ATAAGCGATC TGTGGGCCGG AAGGCTGCAA AAAATGGGCT GCCCGAGGGA AAAAATCGCC
GTATCGCGCA TGGGCGTGGA CATGACGCGT TTTAGCCCGC GTCCGGTGAA AGCGCCCGCA
ACGCCGCTGG AAATCATCTC CGTCGCACGC TTAACCGAAA AAAAAGGCCT GCATGTGGCG
ATCGAAGCCT GCCGTCAGTT GAAAGAGCAG GGCATGACAT TTCGCTATCG CATCCTCGGC
ATTGGCCCGT GGGAACGACG CCTGCGTACC CTCATCGAAC AATATCAACT GGAAGATGTG
GTAGAGATGC CGGGCTTTAA ACCGAGCCAC GAAGTGAAAG CGATGCTCGA CGACGCGGAT
GTCTTCCTGT TGCCATCGGT AACGGGCGCG GATGGCGATA TGGAAGGCAT TCCGGTAGCG
CTGATGGAAG CGATGGCGGT CGGCATTCCG GTGGTTTCTA CTCTGCATAG CGGAATACCG
GAACTGGTGG AGGCTGACAA ATCCGGCTGG CTGGTGCCTG AGAACGATGC TCGCGCACTG
GCGCAACGCT TGGCGGCATT TAGCCAACTG GACACCGACG AACTGGCTCC GGTCGTCAAA
CGCGCGCGCG AAAAAGTCGA ACACGATTTT AACCAGCAGG TGATTAATCG AGAACTCGCC
AGCTTGTTGC AGGCTTTATA G
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| Protein sequence | MKVGFFLLKF PLSSETFVLN QITAFIDMGF EVEIVALQKG DTQNTHAAWT KYNLAARTRW
LQDEPQGKVA KLRHRASQTL RGIHRKNTWQ ALNLKRYGAE SRNLILSAIC GQVATPFYAD
VFIAHFGPAG VTAAKLRELG VIRGKIATIF HGIDISSREV LNHYTPEYQQ LFRRGDLMLP
ISDLWAGRLQ KMGCPREKIA VSRMGVDMTR FSPRPVKAPA TPLEIISVAR LTEKKGLHVA
IEACRQLKEQ GMTFRYRILG IGPWERRLRT LIEQYQLEDV VEMPGFKPSH EVKAMLDDAD
VFLLPSVTGA DGDMEGIPVA LMEAMAVGIP VVSTLHSGIP ELVEADKSGW LVPENDARAL
AQRLAAFSQL DTDELAPVVK RAREKVEHDF NQQVINRELA SLLQAL
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