Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1177 |
Symbol | wcaE |
ID | 6269926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1080524 |
End bp | 1081270 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641725309 |
Product | putative glycosyl transferase |
Protein accession | YP_001879823 |
Protein GI | 187733816 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCTTA GCATAATCAC TGTCGCGTTT CGTAACCTCG AAGGGATAGT CAAAACACAT GCCTCGCTGG CGCATCTGGC GCAGGTGGAA GATATCAGCT TCGAATGGAT TGTTGTCGAT GGCGGTTCCA ACGACGGCAC CCGTGAGTAT CTGGAAAATC TCAATGGTAT CTTTAACCTA CGCTTTGTCA GCGAGCCAGA TAACGGTATC TACGACGCCA TGAACAAAGG CATTGCGATG GCACAAGGCA AGTTCGCGTT GTTTCTCAAT TCGGGCGATA TTTTTCATCA GAATGCCGCA AATTTTGTCC GTAAGTTAAA AATGCAAAAA GATAACGTGA TGATCACCGG CGATGCGCTG CTGGATTTTG GCGACGGGCA TAAAATTAAA CGTAGCGCCA AACCGGGCTG GTATATTTAT CACAGCCTGC CCGCCAGTCA TCAGGCGATA TTTTTCCCTG TATCCGGCTT GAAAAAATGG CGTTATGACC TGGAATATAA AGTTTCTTCC GACTACGCGC TGGCAGCCAA AATGTATAAA GCCGGTTATG CATTTAAAAA ACTCAATGGC CTGGTGTCTG AATTTTCCAT GGGTGGGGTA TCTACCACCA ATAATATGGA ATTGTGTGCT GACGCGAAAA AAGTCCAACG ACAAATATTA CATGTGCCTG GCTTTTGGGC TGAATTATCC TGGCATTTAC GCCAACGTAC TACCTCAAAG ACGAAAGCCT TATATAACAA AGTCTGA
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Protein sequence | MLLSIITVAF RNLEGIVKTH ASLAHLAQVE DISFEWIVVD GGSNDGTREY LENLNGIFNL RFVSEPDNGI YDAMNKGIAM AQGKFALFLN SGDIFHQNAA NFVRKLKMQK DNVMITGDAL LDFGDGHKIK RSAKPGWYIY HSLPASHQAI FFPVSGLKKW RYDLEYKVSS DYALAAKMYK AGYAFKKLNG LVSEFSMGGV STTNNMELCA DAKKVQRQIL HVPGFWAELS WHLRQRTTSK TKALYNKV
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