Gene SbBS512_E1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1172 
Symbolwzc 
ID6270847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1074437 
End bp1076599 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content52% 
IMG OID641725305 
Producttyrosine kinase 
Protein accessionYP_001879819 
Protein GI187731566 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA AAGTAAAACA ACATGCCGCT CCGGTAACGG GCAGTGATGA AATCGATATT 
GGTCGCCTGG TCGGCACCGT CATTGAAGCG CGCTGGTGGG TGATTGGCAT CACCGCTGTA
TTTGCCCTCT GTGCTGTGGT TTACACTTTC TTCGCCACGC CGATTTATAG TGCCGACGCA
CTGGTACAAA TCGAACAAAA CAGCGGCAAT TCGTTAGTGC AGGACATTGG CTCGGCATTA
GCCAACAAAC CGCCTGCATC GGACGCCGAG ATCCAGTTGA TTCGTTCGCG TCTGGTGCTT
GGTAAAACGG TGGACGATCT CGACCTCGAT ATTGCAGTGA GCAAAAACAC GTTCCCGATT
TTCGGTGCGG GCTGGGATCG CCTGATGGGA CGTCAGAACG AGACGGTGAA AGTGACCACC
TTTAACCGCC CGAAAGAGAT GGCGGATCAG GTGTTTACGC TTAATGTGCT GGACAACAAA
AACTACACCC TGAGCAGCGA CGGCGGCTTT AGCGCCCGGG GGCAAGCGGG CCAGATGCTG
AAAAAAGAAG GCGTCACGCT GATGGTTGAA GCCATTCACG CCAGCCCGGG CAGTGAGTTT
ACCGTCACCA AATACTCCAC GCTGGGGATG ATCAACCAAC TGCAAAACAG CCTGACGGTA
ACGGAGAACG GCAAAGACGC TGGCGTTTTG AGCCTGACTT ATACCGGTGA AGATCGTGAA
CAGATCCGCG ACATTCTTAA CAGCATCGCC CGTAACTATC AGGAACAAAA TATTGAGCGC
AAATCGGCGG AAGCGTCGAA AAGCCTCGCC TTCCTCGCGC AACAGTTACC GGAAGTACGT
AGCCGCTTGG ATGTTGCCGA AAACAAACTG AATGCCTTCC GTCAGGATAA AGATTCTGTT
GATCTGCCGC TGGAAGCGAA AGCGGTGCTC GATTCGATGG TGAACATCGA CGCCCAGTTG
AACGAACTGA CCTTTAAAGA GGCGGAAATC TCCAAGCTGT ACACCAAAGT TCACCCGGCG
TACCGCACGC TGCTGGAGAA ACGTCAGGCG CTGGAAGACG AAAAAGCCAA ACTTAACGGT
CGCGTAACGG CGATGCCGAA AACCCAGCAG GAGATTGTCC GTCTGACCCG CGATGTCGAG
TCTGGTCAGC AGGTCTATAT GCAACTGCTG AATAAAGAGC AGGAGCTGAA AATCACCGAA
GCCAGCACCG TCGGCGATGT GCGCATTGTT GACCCGGCAA TCACTCAGCC TGGTGTGCTA
AAACCGAAGA AAGGGCTGAT TATCCTTGGG GCGATTATTC TTGGCCTGAT GCTTTCTATC
GTGGGTGTGC TGCTGCGCTC GTTGTTTAAT CGCGGCATTG AAAGCCCGCA AGTACTGGAA
GAACACGGTA TTAGCGTCTA TGCCAGCATC CCGCTGTCGG AATGGCAGAA AGCGCGTGAT
AGCGTCAAAA CCATCAAAGG GATTAAACGC TATAAACAGA GCCAGCTACT GGCGGTGGGG
AATCCAACCG ATCTGGCGAT TGAAGCCATC CGTAGTCTGC GTACCAGTTT GCACTTCGCG
ATGATGCAGG CACAGAACAA TGTGTTGATG ATGACCGGGG TTAGCCCGTC AATTGGTAAA
ACCTTTGTCT GCGCCAACCT GGCGGCGGTG ATCAGCCAGA CCAATAAACG CGTGTTGTTG
ATCGACTGCG ATATGCGCAA AGGCTACACC CACGAGCTGT TGGGCACCAA TAACGTCAAT
GGCCTGTCGG AAATTCTGAT TGGTCAGGGC GATATTACTA CCGCAGCTAA ACCGACCTCT
ATTGCCAAAT TTGACCTGAT CCCGCGCGGT CAGGTGCCGC CAAATCCTTC TGAACTGTTG
ATGAGCGAAC GCTTTGCCGA ACTGGTGAAC TGGGCGAGTA AAAACTATGA CCTGGTGTTG
ATTGATACGC CGCCGATTCT GGCAGTGACC GATGCGGCAA TTGTTGGTCG TCATGTCGGA
ACCACATTAA TGGTGGCGCG TTATGCGGTC AACACATTGA AAGAAGTGGA AACCAGTCTG
AGCCGCTTTG AGCAAAACGG TATTCCGGTG AAAGGGGTGA TTCTGAACTC CATCTTCCGC
CGCGCCAGCG CGTATCAGGA TTATGGCTAT TACGAATACG AATATAAGTC GGATGCGAAA
TAA
 
Protein sequence
MTEKVKQHAA PVTGSDEIDI GRLVGTVIEA RWWVIGITAV FALCAVVYTF FATPIYSADA 
LVQIEQNSGN SLVQDIGSAL ANKPPASDAE IQLIRSRLVL GKTVDDLDLD IAVSKNTFPI
FGAGWDRLMG RQNETVKVTT FNRPKEMADQ VFTLNVLDNK NYTLSSDGGF SARGQAGQML
KKEGVTLMVE AIHASPGSEF TVTKYSTLGM INQLQNSLTV TENGKDAGVL SLTYTGEDRE
QIRDILNSIA RNYQEQNIER KSAEASKSLA FLAQQLPEVR SRLDVAENKL NAFRQDKDSV
DLPLEAKAVL DSMVNIDAQL NELTFKEAEI SKLYTKVHPA YRTLLEKRQA LEDEKAKLNG
RVTAMPKTQQ EIVRLTRDVE SGQQVYMQLL NKEQELKITE ASTVGDVRIV DPAITQPGVL
KPKKGLIILG AIILGLMLSI VGVLLRSLFN RGIESPQVLE EHGISVYASI PLSEWQKARD
SVKTIKGIKR YKQSQLLAVG NPTDLAIEAI RSLRTSLHFA MMQAQNNVLM MTGVSPSIGK
TFVCANLAAV ISQTNKRVLL IDCDMRKGYT HELLGTNNVN GLSEILIGQG DITTAAKPTS
IAKFDLIPRG QVPPNPSELL MSERFAELVN WASKNYDLVL IDTPPILAVT DAAIVGRHVG
TTLMVARYAV NTLKEVETSL SRFEQNGIPV KGVILNSIFR RASAYQDYGY YEYEYKSDAK