Gene SbBS512_E1167 details

Gene Information

• Locus tag: SbBS512_E1167
• Symbol: dcd
• ID: 6270281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1067855
• End bp: 1068436
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641725300
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_001879814
• Protein GI: 187733400
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCTGT GTGACCGAGA TATTGAAGCC TGGCTTGATG AAGGCCGTTT GTCGATCAAC 
CCACGTCCGC CAGTGGAGCG TATTAACGGC GCGACGGTGG ATGTACGCCT GGGCAATAAA 
TTTCGTACCT TCCGTGGTCA CACGGCAGCG TTTATCGATC TGAGCGGTCC CAAAGATGAA 
GTGAGCGCCG CGCTTGACCG CGTGATGAGC GATGAGATCG TTCTCGACGA GGGCGAGGCG 
TTCTATCTTC ACCCAGGAGA GCTGGCGCTG GCGGTGACGC TGGAGTCGGT GACGCTGCCA 
GCCGATCTGG TGGGCTGGCT GGACGGGCGT TCCTCTTTGG CGCGTCTGGG GCTGATGGTG 
CACGTCACCG CGCACCGTAT CGATCCGGGC TGGTCTGGTT GCATTGTGCT GGAGTTCTAC 
AACTCCGGTA AGCTGCCGCT GGCGCTGCGT CCGGGCATGT TAATTGGTGC GCTGAGCTTT 
GAGCCGCTTT CCGGCCCGGC GGCGCGACCT TACAACCGCC GTGAAGATGC GAAATATCGC 
AACCAGCAGG GCGCGGTAGC CAGCCGAATC GATAAAGACT AA 

 

Protein sequence

MRLCDRDIEA WLDEGRLSIN PRPPVERING ATVDVRLGNK FRTFRGHTAA FIDLSGPKDE 
VSAALDRVMS DEIVLDEGEA FYLHPGELAL AVTLESVTLP ADLVGWLDGR SSLARLGLMV 
HVTAHRIDPG WSGCIVLEFY NSGKLPLALR PGMLIGALSF EPLSGPAARP YNRREDAKYR 
NQQGAVASRI DKD