| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1148 |
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| Symbol | gatR |
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| ID | 6269555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1039880 |
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| End bp | 1040653 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641725277 |
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| Product | galactitol utilization operon repressor |
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| Protein accession | YP_001879795 |
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| Protein GI | 187732335 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTCAT TCGAGCGAAG GAATAAGATC ATCCAATTAG TGAATGAACA GGGAACCGTG
CTTGTTCAGG ATCTGGCGGG AGTATTTGCT GCCTCGGAAG CGACAATCCG TGCCGATTTG
CGCTTTCTCG AACAAAAAGG CGTGGTTACG CGCTTTCATG GCGGTGCGGC GAAAATAATG
TCCGGTAATA GTGAAACCGA GACCCAGGAA GTCGGGTTTA AAGAGCGATT TCAGCTCGCC
AGCGCGCCAA AAAACAGAAT AGCGCAGGCG GCAGTCAAAA TGATCCATGA AGGGATGACC
GTTATTCTCG ACAGCGGAAG TACCACAATG CTTATCGCCG AAGGATTAAT GACCGCTAAA
AATATCACGG TGATTACCAA CAGTCTCCCG GCAGCGTTTG CCCTTTCCGA AAATAAAGAC
ATTACTCTGG TCGTCTGTGG TGGCACGGTC CGCCATAAAA CGCGCTCGAT GCATGGTTCC
ATTGCCGAGC GTTCATTGCA GGATATTAAT GCCGATTTAA TGTTTGTCGG TGCTGATGGT
ATTGATGCGG TTAATGGTAT TACGACCTTT AATGAAGGTT ATTCGATTAG CGGTGCGATG
GTCACCGCCG CTAATAAAGT GATTGCCGTT CTCGATTCAT CGAAATTTAA CCGTCGCGGT
TTTAATCAGG TACTGCCAAT CGAAAAAATT GACATTATTA TTACCGATGA TGCTGTATCA
GAGGTGGATA AACTGGCATT GCAGAAGACA CGGGTAAAAT TAATTACGGT GTAG
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| Protein sequence | MNSFERRNKI IQLVNEQGTV LVQDLAGVFA ASEATIRADL RFLEQKGVVT RFHGGAAKIM
SGNSETETQE VGFKERFQLA SAPKNRIAQA AVKMIHEGMT VILDSGSTTM LIAEGLMTAK
NITVITNSLP AAFALSENKD ITLVVCGGTV RHKTRSMHGS IAERSLQDIN ADLMFVGADG
IDAVNGITTF NEGYSISGAM VTAANKVIAV LDSSKFNRRG FNQVLPIEKI DIIITDDAVS
EVDKLALQKT RVKLITV
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