Gene SbBS512_E1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1136 
Symbol 
ID6269295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1027973 
End bp1028791 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content48% 
IMG OID641725265 
Productglycosyl hydrolase family 25 
Protein accessionYP_001879783 
Protein GI187730678 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.284707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCGCTC TATTATGCGC TCTTGGGCTA 
ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT
CAGATTACAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCTATTCGT
ATTCCTGCCA GTTACACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC
TGGCAGCGTG TGGCAAAAAT GCGCGATAAC GGTATTCGCT TACAATTTGC CTTTATTAAG
GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGT
GAAAATGGCC TGCTGCGCGG GGCATATCAT TATTTCTCCC CGTCGGTAGC AGCACCGGTT
CAGGTGCGAT TATTTCTGCA AACGGTAGAT TTCTCACAAG GCGATTTCCC TGCGGTACTG
GACGTAGAAG AGCGAGGAAA ATTATCGGCA AAAGAATTAC GCAAGAGGGT AAGTCAGTGG
CTAAAAATGG TCGAAAAAAG TACGGGGAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT
TATCACACGA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT
CAACGTCGTC CGGACAATGA CGGCATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGA
CAGGTAGATG GCATCAATGG TCCGGTGGAT TTTAATGTGT TTAATGGCAC GGTGGAGGAG
TTGCAGGGGT TCGTTGATGG GATTAAAGAA ACGCCTTAA
 
Protein sequence
MQLRITSRKK LTALLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIR 
IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR
ENGLLRGAYH YFSPSVAAPV QVRLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW
LKMVEKSTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG
QVDGINGPVD FNVFNGTVEE LQGFVDGIKE TP