Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1136 |
Symbol | |
ID | 6269295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1027973 |
End bp | 1028791 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641725265 |
Product | glycosyl hydrolase family 25 |
Protein accession | YP_001879783 |
Protein GI | 187730678 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.284707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCGCTC TATTATGCGC TCTTGGGCTA ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT CAGATTACAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCTATTCGT ATTCCTGCCA GTTACACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC TGGCAGCGTG TGGCAAAAAT GCGCGATAAC GGTATTCGCT TACAATTTGC CTTTATTAAG GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGT GAAAATGGCC TGCTGCGCGG GGCATATCAT TATTTCTCCC CGTCGGTAGC AGCACCGGTT CAGGTGCGAT TATTTCTGCA AACGGTAGAT TTCTCACAAG GCGATTTCCC TGCGGTACTG GACGTAGAAG AGCGAGGAAA ATTATCGGCA AAAGAATTAC GCAAGAGGGT AAGTCAGTGG CTAAAAATGG TCGAAAAAAG TACGGGGAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT TATCACACGA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT CAACGTCGTC CGGACAATGA CGGCATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGA CAGGTAGATG GCATCAATGG TCCGGTGGAT TTTAATGTGT TTAATGGCAC GGTGGAGGAG TTGCAGGGGT TCGTTGATGG GATTAAAGAA ACGCCTTAA
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Protein sequence | MQLRITSRKK LTALLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIR IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR ENGLLRGAYH YFSPSVAAPV QVRLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW LKMVEKSTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG QVDGINGPVD FNVFNGTVEE LQGFVDGIKE TP
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