Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1120 |
Symbol | |
ID | 6270994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1018668 |
End bp | 1019018 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725251 |
Product | IS1 transposase |
Protein accession | YP_001879769 |
Protein GI | 187731735 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAACAG ATGTCTGGAA ATATAGGGGC AAATCCATGA TTGTCTGCGC TGAAATGGAC GAACAGTGGG GCTACGTCGG TGCTAAATCA CGTCAGCGCT GGCTGTTTTA CGCGTATGAC AGGATACGGA GGACGGTTGT GGGGCACGTC TTCGGTGAAC GCACTCTGGC CACACTGGAG CGTCTTCTGA GCCTGCTGTC GGCCTTTGAG GTCGTGGTAT GGATGACGGA TGGCTGGCCG CTGTATGAAT CACGCCTGAA GGGAAAGCTG CACGTTATCA GCAAGCGTTA CACTCAGCGC ATTGAGCGAC ATAATCTGAA TCTGAGACAA CATCTGGGTA AGGCAGTATG A
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Protein sequence | MITDVWKYRG KSMIVCAEMD EQWGYVGAKS RQRWLFYAYD RIRRTVVGHV FGERTLATLE RLLSLLSAFE VVVWMTDGWP LYESRLKGKL HVISKRYTQR IERHNLNLRQ HLGKAV
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