Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1091 |
Symbol | |
ID | 6269622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 993648 |
End bp | 994391 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641725228 |
Product | tail assembly protein |
Protein accession | YP_001879746 |
Protein GI | 187730101 |
COG category | [R] General function prediction only |
COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.352892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGA CTGAATCAGC GATTCTGGCG CATGCCCGGC GGTGTGCGCC TGCGGAGTCG TGCGGCTTCG TGATAAGCAC GCCGGAGGGG GAGCGGTATA TCCCTTGTGT GAATATTTCT GCAGAGCCGG AGGCGTATTT TCGTATCGCA CCGGAAGACT GGCTGCGGGC AGAGATGCAG GGGGAGATTG TGGCACTGGT CCACAGTCAT CCCGGTGAGC TGCCCTGGCT GAGCGAGGCT GACCGGCGGC TGCAGATAAA AAGCGCACTG CCCTGGTGGC TGGTCTGCCG GGGGGAAATT CATAAATTCC GCTGTGTGCC ACATCTGACA GGACGGCGCT TTGAGCACGG GGTGACGGAC TGTTACACGC TGTTCCGGGA TGCATACCAT CTGGCGGGAA TTGATATGCC GGATTTTCAT CGCGAGGATG ACTGGTGGCG CAACGGCCAG AACCTGTACC TGGACAATAT GGCGGTCACC GGCTTTTACC GGGTGCCCCT GTCCTCTGCA CAGCCGGGCG ATATTCTGCT GTGCTGCTTT GGTGCTTCGG TACCGAACCA TGCCACCATT TACTGCGGCA ACGGTGAGCT GCTTCACCAT CTGCCTGAAC AACTGAGTAA ACGGGAGAGG TATTCCGAAA AATGGCAACG ACGAACGCAT TCTGTCTGGC GTCACCGCCA CTGGCACGCA TCTGCCTTCA CGGGGATTTA CAACGATTTG GCCGCCGCCT CAGCCTGTAT GTGA
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Protein sequence | MTQTESAILA HARRCAPAES CGFVISTPEG ERYIPCVNIS AEPEAYFRIA PEDWLRAEMQ GEIVALVHSH PGELPWLSEA DRRLQIKSAL PWWLVCRGEI HKFRCVPHLT GRRFEHGVTD CYTLFRDAYH LAGIDMPDFH REDDWWRNGQ NLYLDNMAVT GFYRVPLSSA QPGDILLCCF GASVPNHATI YCGNGELLHH LPEQLSKRER YSEKWQRRTH SVWRHRHWHA SAFTGIYNDL AAASACM
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