Gene SbBS512_E1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1080 
Symbol 
ID6269506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp983919 
End bp984836 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID641725218 
Producthypothetical protein 
Protein accessionYP_001879736 
Protein GI187733684 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.231877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTGG CCGGGAGTAG TTTACTGACG TTGCTCGATG ATATCGCCAC ACTACTGGAC 
GATATCTCCG TGATGGGCAA ACTGGCGGCG AAGAAAACCG CCGGTGTATT AGGGGATGAC
TTATCGCTCA ATGCGCAACA AGTTTCAGGC GTGCGGGCCA ACCGGGAACT TCCCGTGGTC
TGGGGCGTGG CGAAAGGATC GCTGATTAAT AAAGTGATTC TGGTGCCGCT GGCGCTGATC
ATCAGTGCGT TTATCCCGTG GGCGATTACG CCTCTGTTGA TGATTGGTGG CGCGTTTCTC
TGCTTTGAAG GAGTAGAGAA AGTGCTGCAT ATGCTGGAGG CGCGTAAACA TAAAGAAGAT
CCGGCGCAGA GCCAGCAGCG TCTGGAGAAG CTGGCGGCGC AGGATCCGCT GAAGTTTGAA
AAGGACAAAA TAAAAGGGGC GATTCGTACC GATTTTATAT TGTCTGCCGA AATCGTCGCC
ATCACGCTGG GGATTGTGGC CGAAGCGCCG TTGCTTAATC AGGTGCTGGT GCTTTCAGGC
ATCGCGCTGG TAGTGACCGT GGGCGTCTAC GGTCTGGTAG GGGTTATCGT TAAGATTGAT
GACCTGGGGT ATTGGCTGGC GGAAAAATCC AGCGCGCTGA TGCAGGCATT AGGTAAAGGG
TTATTGATCA TTGCGCCCTG GCTGATGAAA GCGTTATCGA TTGTCGGCAC GCTGGCGATG
TTCCTTGTCG GCGGCGGGAT TGTGGTACAT GGTATTGCGC CGCTGCATCA CGCCATTGAA
CATTTCGCCG GGCAGCAAAG TGCAGTGGTG GCGATGATAT TACCGACTGT TTTAAATCTG
ATTCTTGGAT TTATCATCGG CGGCATAGTG GTGCTGGGAG TGAAAGCCGT AGCGAAAATA
CGCGGTCAGG CACATTAA
 
Protein sequence
MLLAGSSLLT LLDDIATLLD DISVMGKLAA KKTAGVLGDD LSLNAQQVSG VRANRELPVV 
WGVAKGSLIN KVILVPLALI ISAFIPWAIT PLLMIGGAFL CFEGVEKVLH MLEARKHKED
PAQSQQRLEK LAAQDPLKFE KDKIKGAIRT DFILSAEIVA ITLGIVAEAP LLNQVLVLSG
IALVVTVGVY GLVGVIVKID DLGYWLAEKS SALMQALGKG LLIIAPWLMK ALSIVGTLAM
FLVGGGIVVH GIAPLHHAIE HFAGQQSAVV AMILPTVLNL ILGFIIGGIV VLGVKAVAKI
RGQAH