| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1077 |
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| Symbol | |
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| ID | 6269852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 981793 |
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| End bp | 983469 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641725217 |
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| Product | diguanylate cyclase (GGDEF) domain protein |
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| Protein accession | YP_001879735 |
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| Protein GI | 187733517 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000734609 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC AGAGCTGGTT GAAAAAAATC GCACGCCGCC TGGGGCCTGG TCATGTCGTT
AATCTCTGCT TTATCGTGGT ATTGCTTTTT TCCACCTTGC TGACCTGGCG TGAAGTGGTA
GTGCTGGAAG ATGCCTATAT CTCCAGCCAG CGTAATCATC TGGAAAACGT AGCCAACGCG
CTCGATAAGC ATTTGCAGTA TAACGTCGAC AAACTGATCT TTTTGCGTAA TGGCATGCGC
GAAGCTCTCG TAGCGCCACT GGATTTCACT TCACTGCGTA ATGCTGTAAC CGAGTTCGAA
CAGCATCGCG ACGAGCACGC CTGGCAAATT GAACTCAACC GACGACGCAC CCTGTCAGTC
AATGGCGTAT CGGATGCATT AGTCAGCGAG GGGAATCTCC TGTCTCGCGA AAATGAAAGC
CTCGACAATG AAATTACCGC TGCACTGGAA GTTGGTTACT TGCTGCGACT GGCGCACAAC
ACCTCGTCGA TGGTTGAACA GGCGATGTAT GTCTCGCGTG CCGGATTTTA CGTTTCGACG
CAGCCGACCT TGTTTACGCG CAATGTACCA ACGCGTTATT ACGGCTATGT CACCCAACCC
TGGTTTATCG GCCATTCGCA ACGAGAAAAT CGTCACCGCG CGGTACGCTG GTTTACTTCG
CAACCGGAAC ACGCCAGCAA TACTGAACCG CAGGTTACCG TCAGTGTTCC GGTAGACAGT
AATAACTACT GGTATGGCGT GCTGGGGATG AGTATTCCCG TGCGTACCAT GCAGCAATTT
TTAAGAAACG CCATCGATAA AAACCTCGAT GGTGAGTATC AGCTCTATGA CAGTAAGCTG
AGATTTTTGA CCTCTTCCAA TCCTGACCAT CCAACAGGGA ATATTTTTGA TCCTCGTGAA
CTGGCCTTGC TGGCGCAGGC GATGGAACAT GACACGCGGG GCGGCATTCG TATGGACAGT
CGCTATGTTA GCTGGGAACG TCTGGACCAT TTCGACGGTG TGCTGGTGCG CGTCCATACG
CTAAGCGAAG CCGTGCGCGG CGATTTCGGC AGTATCAGCA TTGCATTAAC CCTGCTGTGG
GCGCTCTTTA CCACCATGTT ACTCATCTCC TGGTATGTGA TTCGCCGGAT GGTTAGCAAC
ATGTATGTTC TGCAAAGCTC GTTGCAGTGG CAGGCGTGGC ACGACACCTT AACCCGTTTA
TATAATCGTG GCGCACTGTT TGAAAAAGCC CGTCCGCTCG CGAAATTGTG TCAGACGCAC
CAACATCCTT TTTCTGTCAT TCAGGTCGAC CTTGACCATT TTAAAGCGAT TAATGACCGC
TTTAGTCATC AGGCGGGCGA CCGTGTTCTT TCTCATGCTG CCGGATTAAT TAGCAGTTCC
TTGCGTGCGC AGGACGTTGC CGGGCGGGTC GGTGGTGAGG AGTTTTGTGT GATTCTGCCA
GGCGCGAGTC TGACGGAGGC TGCGGAAGTC GCAGAACGTA TTCGCCTGAA GTTAAATGAA
AAAGAGATGT TGATTGCTAA GAGTACGACG ATACGCATCA GTGCCTCGTT GGGGGTAAGT
AGCAGCGAGG AAACCGGTGA TTATGATTTT GAACAACTCC AGTCACTGGC TGACCGTCGG
CTTTATCTCG CTAAACAGGC CGGGCGTAAT CGGGTATGCG CGAGCGATAA CGCTTAA
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| Protein sequence | MENQSWLKKI ARRLGPGHVV NLCFIVVLLF STLLTWREVV VLEDAYISSQ RNHLENVANA
LDKHLQYNVD KLIFLRNGMR EALVAPLDFT SLRNAVTEFE QHRDEHAWQI ELNRRRTLSV
NGVSDALVSE GNLLSRENES LDNEITAALE VGYLLRLAHN TSSMVEQAMY VSRAGFYVST
QPTLFTRNVP TRYYGYVTQP WFIGHSQREN RHRAVRWFTS QPEHASNTEP QVTVSVPVDS
NNYWYGVLGM SIPVRTMQQF LRNAIDKNLD GEYQLYDSKL RFLTSSNPDH PTGNIFDPRE
LALLAQAMEH DTRGGIRMDS RYVSWERLDH FDGVLVRVHT LSEAVRGDFG SISIALTLLW
ALFTTMLLIS WYVIRRMVSN MYVLQSSLQW QAWHDTLTRL YNRGALFEKA RPLAKLCQTH
QHPFSVIQVD LDHFKAINDR FSHQAGDRVL SHAAGLISSS LRAQDVAGRV GGEEFCVILP
GASLTEAAEV AERIRLKLNE KEMLIAKSTT IRISASLGVS SSEETGDYDF EQLQSLADRR
LYLAKQAGRN RVCASDNA
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