Gene SbBS512_E1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1061 
Symbol 
ID6272075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp972297 
End bp972968 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID641725200 
Producthypothetical protein 
Protein accessionYP_001879719 
Protein GI187730302 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000115986 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAC GCTTTGCCCA ATCCCAAACG CGTGAAGATT ACCTTGCGCT TCTCGCGGAA 
GATATTGAAC GCGATATTCC CTACGATCCC GAACCCATTG GCAGATACAA CGTCGCGCCG 
GGAACCAAAG TTCTTCTGCT CAGTGAACGT GATGAACACC TTCATCTGGA TCCGGTTTTC 
TGGGGATATG CTCCCGGATG GTGGGATAAA CCGCCGCTGA TTAACGCCCG CGTAGAAACT 
GCCGCAACCA GTCGCATGTT TAAACCGCTC TGGCAACATG GTCGGGCAAT CTGTTTTGCC 
GATGGCTGGT TTGAGTGGAA AAAAGAAGGC GACAAAAAAC AGCCTTTTTT TATCTATCGT 
GCTGATGGAC AACCTATTTT TATGGCCGCG ATAGGTAGCA CACCATTTGA GCATGGTGAC 
GAAGCCGAAG GATTTTTAAT TGTCACTGCT GCAGCAGACC AGGGTCTGGT AGACATTCAT 
GACCGCCGCC CGCTGGTTCT GTCGCCAGAA GCTGCACAGG AATGGATGCG GCAAGAGATT 
GGCGGTAAAG AAGCATCAGA AATTGCTACC AACGGCTGTG TGCCAGCAAA CCAGTTCACC 
TGGCACCCGG TATCGCGCGC GGTAGGTAAT GTCAAAAACC AGGGCGCGGA GTTAATTCAA 
CCTGTTTGTT GA
 
Protein sequence
MCGRFAQSQT REDYLALLAE DIERDIPYDP EPIGRYNVAP GTKVLLLSER DEHLHLDPVF 
WGYAPGWWDK PPLINARVET AATSRMFKPL WQHGRAICFA DGWFEWKKEG DKKQPFFIYR 
ADGQPIFMAA IGSTPFEHGD EAEGFLIVTA AADQGLVDIH DRRPLVLSPE AAQEWMRQEI 
GGKEASEIAT NGCVPANQFT WHPVSRAVGN VKNQGAELIQ PVC