| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1054 |
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| Symbol | fliD |
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| ID | 6270400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 966349 |
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| End bp | 967755 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641725194 |
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| Product | flagellar capping protein |
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| Protein accession | YP_001879713 |
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| Protein GI | 187730993 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.47056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTA TTTCATCGCT GGGAGTCGGG TCAGGTCTGG ATTTAAGTTC AATCCTTGAT
AGCCTCACCG CCGCGCAAAA AGCGACGCTA ACCCCTATTT CAAATCAGCA ATCGTCGTTT
ACCGCTAAAC TTAGCGCCTA CGGTACGCTG AAAAGCGCGC TGACGACTTT CCAGACCGCC
AATACTGCAT TGTCTAAAGC CGATCTTTTT TCCGCCACCA GCACTACCAG CAGCACCACC
GCGTTCAGTG CCACCACTGC GGGTAACGCC ATCGCCGGGA AATACACCAT CAGCGTCACC
CATCTGGCGC AGGCGCAAAC CCTGACCACG CGCACCACCA GAGATGATAC GAAAACGGCG
ATCGCCACCA GCGACAGCAA ACTCACCATT CAACAAGGCG GCGACAAAGA TCCGATTACC
ATTGATATCA GCGCGGCTAA CTCATCGTTA AGCGGGATCC GTGATGCTAT CAACAACGCA
AAAGCGGGCG TAAGTGCGAG CATCATTAAC GTGGGTAACG GTGAATATCG TCTGTCAGTC
ACATCAAATG ACACCGGCCT TGATAATGCG ATGACACTCT CGGTCAGCGG TGATGATGCG
CTACAAAGTT TTATGGGCTA TGACGCCAGT GCCAGCAGCA ACGGTATGGA GGTCTCGGTC
GCCGCCCAGA ATGCGCAGCT GACGGTCAAC AACGTCGCCA TTGAGAACAG CAGCAACACC
ATCAGCGACG CGCTGGAAAA CATCACCCTG AACCTGCACG ATGTCACCAC GGGCAACCAG
ACGCTAACCA TCACTCAGGA CACCTCCAAA GCGCAAACGG CGATTAAAGA CTGGGTGAAT
GCCTATAACT CGTTAATAGA TACCTTCAGT AGCCTGACCA AATACACCGC CGTAGATGCG
GAAGCTGATA GCCAGAGTTC TAGCAATGGC GCACTGCTCG GCGACTCCAC GCTGCGGACG
ATTCAGACGC AGTTGAAGTC GATGCTGAGT AATACCGTCA GTTCTTCCAG CTATAAAACG
CTGGCGCAGA TTGGTATCAC GACCGATCCC AGCGATGGCA AACTGGAACT GGATGCCGAC
AAACTCACCG CTGCACTGAA AAAAGATGCC AGCGGCGTAG GTGCATTGAT TGTTGGCGAT
GGTAAAAAAA CCGGCATCAC GACCACCATC GGCAGCAACC TGACCAGTTG GCTTTCGACA
ACGGGCATTA TTAAAGCCGC TACCGATGGC GTTAGTAAGA CCCTGAATAA GTTAACTAAA
GACTACAACG CCGCCAGCGA TCGCATTGAT GCGCAGGTCG CGCGCTACAA AAAACAATTT
ACCCAACTGG ACGTTTTAAT GACCTCGTTA AACAGCACCA GCAGCTACTT AACGCAGCAG
TTCGAAAACA ACAGTAATTC CAAGTAA
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| Protein sequence | MASISSLGVG SGLDLSSILD SLTAAQKATL TPISNQQSSF TAKLSAYGTL KSALTTFQTA
NTALSKADLF SATSTTSSTT AFSATTAGNA IAGKYTISVT HLAQAQTLTT RTTRDDTKTA
IATSDSKLTI QQGGDKDPIT IDISAANSSL SGIRDAINNA KAGVSASIIN VGNGEYRLSV
TSNDTGLDNA MTLSVSGDDA LQSFMGYDAS ASSNGMEVSV AAQNAQLTVN NVAIENSSNT
ISDALENITL NLHDVTTGNQ TLTITQDTSK AQTAIKDWVN AYNSLIDTFS SLTKYTAVDA
EADSQSSSNG ALLGDSTLRT IQTQLKSMLS NTVSSSSYKT LAQIGITTDP SDGKLELDAD
KLTAALKKDA SGVGALIVGD GKKTGITTTI GSNLTSWLST TGIIKAATDG VSKTLNKLTK
DYNAASDRID AQVARYKKQF TQLDVLMTSL NSTSSYLTQQ FENNSNSK
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