| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1022 |
|---|
| Symbol | otsB |
|---|
| ID | 6269779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 943943 |
|---|
| End bp | 944740 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641725165 |
|---|
| Product | trehalose-6-phosphate phosphatase |
|---|
| Protein accession | YP_001879687 |
|---|
| Protein GI | 187730228 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1877] Trehalose-6-phosphatase |
|---|
| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAGAAC CGTTAACCGA AACCCCTGAA CTATCCGCGA AATATGCCTG GTTTTTTGAT
CTCGATGGAA CGCTGGAAAT CAAACCGCAT CCCGATCAGG TCGTCGTGCC TGACAATATT
CTGCAAGGAC TACAGCTACT GGCAACCGCA AGTGATGGTG CATTGGCATT GATATCAGGG
CGCTCAATGG TGGAGCTTGA CGCACTGGCA AAACCTTATC GCTTCCCGTT AGCGGGCGTG
CATGGGGCGG AGCGCCGTGA CATCAATGGT AAAACGCATA TCGTTCATCT GCCGGATGCG
ATTGCGCGTG ATATTAGCGT GCAACTGCAT ACAGTTATCG CTCAGTATCC CGGCGCGGAG
CTGGAGGCGA AAGGGATGGC TTTTGCGCTG CATTATCGTC AGGCTCCGCA GCATGAAGAC
GCATTAATGA CATTAGCGCA ACGTATTACT CAGATCTGGC CACAAATGGC GTTACAGCAG
GGAAAGTGTG TTGTCGAGAT CAAACCGAGA GGTACCAGTA AAGGTGAGGC AATTGCAGCT
TTTATGCAGG AAGCTCCCTT TATCGGGCGA ACGCCCGTAT TTCTGGGCGA TGATTTAACC
GATGAATCTG GCTTCGCAGT CGTTAACCGA CTGGGCGGAA TGTCAGTAAA AATTGGCACA
GGTGCAACTC AGGCATCATG GCGACTGGCG GGTGTGCCGG ATGTCTGGAG CAGGCTTGAA
ATGATAACCA CCGCATTACA ACAAAAAAGA GAAAATAACA GGAGTGATGA CTATGAGTCG
TTTAGTCGTA GTATCTAA
|
|---|
| Protein sequence | MTEPLTETPE LSAKYAWFFD LDGTLEIKPH PDQVVVPDNI LQGLQLLATA SDGALALISG
RSMVELDALA KPYRFPLAGV HGAERRDING KTHIVHLPDA IARDISVQLH TVIAQYPGAE
LEAKGMAFAL HYRQAPQHED ALMTLAQRIT QIWPQMALQQ GKCVVEIKPR GTSKGEAIAA
FMQEAPFIGR TPVFLGDDLT DESGFAVVNR LGGMSVKIGT GATQASWRLA GVPDVWSRLE
MITTALQQKR ENNRSDDYES FSRSI
|
|---|
| |