| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1016 |
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| Symbol | |
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| ID | 6269433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 938734 |
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| End bp | 940377 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641725160 |
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| Product | invasion plasmid antigen |
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| Protein accession | YP_001879682 |
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| Protein GI | 187734205 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCTG TAAATAATCC CCCCCTATCC ACTGGAAACG TCTCTTTTTA CAGAACTACA
TCAATCGACA ATGTTCACAA TAATTATCTC TCCGAATGGG TTGAATGGAC TAAAAACAGC
ATTTCCGGAG AAAACAGGGA AACTGCTTTT ACCCGGCTCC AATTATGTCT GGAGAACAGT
GAAACATCGT TGGACTTATC TTGTTTAGGT CTCAGATCTC TACCACGATT GCCTGACAAT
CTTGATGAAA TTAATGTAAG CAATAACCAA CTATCAATGC TCCCCGAGCT ACCAAGGGCA
TTGAAAGAGC TGAATGCAAG CAGTAATCAA TTATCTGCAC TTCCTGAATT ACCAGTGTCG
CTGGAATATA TAAATGTGAG TGATAACCAT TTGTTCGCAC TTCCTGAATT ACCTGCGTCA
CTAGAATATA TTAATGTAAG TGACAATCAC CTGTCTGTAC TTCCGAGGTT ACCAATGTCA
TTGGAATTAC TTGATGCAGC CAGAAATGCT TTGGAAGTAA TACCAGATTT TCCAGAAAGA
GATGATCATA TTATAAGAAT ATTCTGGCTT AATCAGAACC GGATCACGGC AATTCCGGAA
AGCATACTTG GCCTCAGTTC TGATAGCGTT GTCAATCTTA GAGAAAATCA ACTATCTCCC
AGAATAATGC AAACTTTGTT ACAACAAACC GCCCAACCGG ACTACCACGG CCCACGGATT
TACTTCTCCA TGAGTGACGG ACAACAGAAT ACACTCCATC GCCCCCTGGC TGATGCCGTG
ACAGCATGGT TCCCGGAAAA CAAACAATCT GATGTATCAC AGATATGGCA TGCTTTTGAA
CATGAAGAGC ACGCCAACAC CTTTTCCGCG TTCCTTGACC GCCTTTCCGA TACCGTCTCT
GCACGCAATA CCTCCGGATT CCGTGAACAG GTCGCTGCAT GGCTGGAAAA ACTCAGTGCC
TCTGCGGAGC TTCGACAGCA GTCTTTCGCT GTTGCTGCTG ATGCCACTGA GAGCTGTGAG
GACCGTGTCG CGCTCACATG GAACAATCTC CGGAAAACCC TCCTGGTCCA TCAGGCATCA
GAAGGCCTTT TCGATAATGA TACCGGCGCT CTGCTCTCCC TGGGCAGGGA AATGTTCCGC
CTCGAAATTC TGGAGGACAT TGCCCGGGAT AAAGTCAGAA CTCTCCATTT TGTGGACGAG
ATAGAAGTCT ACCTGGCCTT CCAGACCATG CTCGCAGAGA AACTTCAGCT CTCCACTGCC
GTGAAGGAAA TGCGTTTCTA TGGCGTGTCG GGAGTGACAG CAAATGACCT CCGCACTGCC
GAAGCCATGG TCAGAAGCCG TGAAGAGAAT GAATTTACGG ACTGGTTCTC CCTCTGGGGA
CCATGGCATG CTGTACTGAA GCGTACGGAA GCTGACCGCT GGGCGCTGGC AGAAGAGCAG
AAATATGAGA TGCTGGAGAA TGAGTACCCT CAGAGGGTGG CTGACCGGCT GAAAGCATCA
GGTCTGAGCG GTGATGCGGA TGCGGAGAGG GAAGCCGGTG CACAGGTGAT GCGTGAGACT
GAACAGCAGA TTTACCGTCA GCTGACTGAC GAGGTACTGG CCCTGCGATT GTCTGAAAAC
GGCTCACAAC TGCACCATTC ATAA
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| Protein sequence | MLPVNNPPLS TGNVSFYRTT SIDNVHNNYL SEWVEWTKNS ISGENRETAF TRLQLCLENS
ETSLDLSCLG LRSLPRLPDN LDEINVSNNQ LSMLPELPRA LKELNASSNQ LSALPELPVS
LEYINVSDNH LFALPELPAS LEYINVSDNH LSVLPRLPMS LELLDAARNA LEVIPDFPER
DDHIIRIFWL NQNRITAIPE SILGLSSDSV VNLRENQLSP RIMQTLLQQT AQPDYHGPRI
YFSMSDGQQN TLHRPLADAV TAWFPENKQS DVSQIWHAFE HEEHANTFSA FLDRLSDTVS
ARNTSGFREQ VAAWLEKLSA SAELRQQSFA VAADATESCE DRVALTWNNL RKTLLVHQAS
EGLFDNDTGA LLSLGREMFR LEILEDIARD KVRTLHFVDE IEVYLAFQTM LAEKLQLSTA
VKEMRFYGVS GVTANDLRTA EAMVRSREEN EFTDWFSLWG PWHAVLKRTE ADRWALAEEQ
KYEMLENEYP QRVADRLKAS GLSGDADAER EAGAQVMRET EQQIYRQLTD EVLALRLSEN
GSQLHHS
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