| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1008 |
|---|
| Symbol | |
|---|
| ID | 6271413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 933168 |
|---|
| End bp | 933986 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641725154 |
|---|
| Product | ISSd1, transposase orfB |
|---|
| Protein accession | YP_001879676 |
|---|
| Protein GI | 187730903 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.660262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCAGG TATTTGGTGT ATCCAGGAGC GGTTATTACA ACTGGGTACA GCATGAACCC
TCAGACAGAA AACAAAGTGA TGAGCGGCTA AAACTGGAGA TTAAGGTGGC ACATATCCGC
ACTCGCGAAA CATATGGAAC CCGGCGGCTC CAGACGGAGC TGGCAGAGAA TGGCATCATC
GTTGGTCGTG ACCGACTGGC ACGTCTTCGT AAGGAGCTAA GGCTACGCTG TAAGCAGAAA
CGCAAGTTCA GAGCGACTAC GAACCCGAAC CACAATCTGC CAGTTGCGCC AAATCTGCTG
AACCAGACGT TCGCTCCTAC AGCACCAAAT CAGGTCTGGG TGGCGGACCT GACGTATGTT
GCCACACAGG AGGGATGGTT GTACCTCGCT GGCATCAAAG ATGTTTATAC GTGCGAAATT
GTCGGCTACG CCATGGGAGA GCGCATGACA AAAGAGCTGA CAGGTAAAGC CCTGTTTATG
GCGCTCAGGA GCCAGCGCCC ACCTGCCGGG CTAATCCACC ACTCTGATCG AGGTTCACAG
TACTGCGCAT ACGATTACCG GGTCATACAG GAGCAGTCTG GTCTGAAAAC ATCAATGTCG
CGTAAAGGTC ACTGTTACGA CAACGCTCCG ATGGAAAGCT TCTGGGGAAC GCTGAAAAAT
GAGAGCCTGA GCCACTATCG TTTTAATAAC CGGGATGAAG CCATCTCAGT AATACGGGAA
TACATTGAGA TTTTCTACAA TCGTCAGCGT CGTCACTCTC GTCTGGGGAA TATCTCCCCG
GCAGCCTTCA GGGAAAAATA TCATCAGATG GCTGCTTAA
|
|---|
| Protein sequence | MCQVFGVSRS GYYNWVQHEP SDRKQSDERL KLEIKVAHIR TRETYGTRRL QTELAENGII
VGRDRLARLR KELRLRCKQK RKFRATTNPN HNLPVAPNLL NQTFAPTAPN QVWVADLTYV
ATQEGWLYLA GIKDVYTCEI VGYAMGERMT KELTGKALFM ALRSQRPPAG LIHHSDRGSQ
YCAYDYRVIQ EQSGLKTSMS RKGHCYDNAP MESFWGTLKN ESLSHYRFNN RDEAISVIRE
YIEIFYNRQR RHSRLGNISP AAFREKYHQM AA
|
|---|
| |