Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0993 |
Symbol | mtfA |
ID | 6270125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 921162 |
End bp | 921959 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641725140 |
Product | Mlc titration factor MtfA |
Protein accession | YP_001879663 |
Protein GI | 187731314 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000000614673 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGT GGCCCTGGAA AGTACAAGAA TCAGCACATC AAACTGCCCT TCCCTGGCAG GAAGCACTAT CGATCCCCCT TTTAACGTGT CTGACGGAAC AGGAACAAAG CAAATTAGTC ACTCTTGCCG AACGTTTTTT ACAGCAAAAG CGGCTTGTTC CTTTACAGGG CTTTGAACTG GATTCATTAA GAAGCTGCCG GATAGCACTT CTATTTTGCC TACCCGTTCT GGAGTTAGGA CTGGAATGGC TGGATGGTTT TCATGAAGTC TTAATTTATC CTGCGCCATT TGTGGTCGAT GATGAATGGG AAGACGATAT CGGTCTGGTG CATAACCAAC GTATTGTTCA GTCAGGTCAG AGCTGGCAGC AAGGGCCTAT CGTTTTGAAC TGGTTGGATA TACAAGATTC TTTTGATGCT TCTGGTTTTA ACCTGATTAT TCATGAAGTC GCTCATAAGC TGGACACCCG TAACGGCGAT CGCGCCAGCG GAGTTCCCTT TATTCCGTTG CGTGAGGTTG CTGGCTGGGA ACACGATCTT CATGCTGCAA TGAACAACAT TCAGGAAGAA ATCGAATTGG TTGGCGAGAA TGCGGCGAGC ATTGATGCTT ATGCAGCCAG CGATCCTGCT GAATGTTTTG CCGTACTTTC TGAATATTTC TTTAGCGCCC CAGAACTTTT TGCTCCTCGT TTCCCTTCAT TGTGGCAACG TTTCTGCCAA TTTTATCAAC AAGATCCTTT GCAGAGACTG CATCACGCTA ATGATACAGA CTCGTTTTCG GCGACGAATG TTCATTAA
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Protein sequence | MIKWPWKVQE SAHQTALPWQ EALSIPLLTC LTEQEQSKLV TLAERFLQQK RLVPLQGFEL DSLRSCRIAL LFCLPVLELG LEWLDGFHEV LIYPAPFVVD DEWEDDIGLV HNQRIVQSGQ SWQQGPIVLN WLDIQDSFDA SGFNLIIHEV AHKLDTRNGD RASGVPFIPL REVAGWEHDL HAAMNNIQEE IELVGENAAS IDAYAASDPA ECFAVLSEYF FSAPELFAPR FPSLWQRFCQ FYQQDPLQRL HHANDTDSFS ATNVH
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