Gene SbBS512_E0967 details

Gene Information

• Locus tag: SbBS512_E0967
• Symbol: cobT
• ID: 6272691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 890701
• End bp: 891786
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641725119
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_001879646
• Protein GI: 187732263
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00000443134
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACAC TTGCCGATTT ACTGAATACG ATCCCTGCTA TCGATCCTGC CGCTATGTCG 
CGTGCACAAC GGCATATTGA CGGGTTACTC AAACCTGTTG GTAGCCTGGG AAGGCTGGAG 
GCGCTTGCCA TACAACTGGC GGGAATGCCG GGGTTGAATG GCATACCGCA TGTGGGCAAA 
AAAGCGGTAC TGGTTATGTG TGCCGATCAC GGCGTCTGGG AGGAAGGGGT CGCTATTTCC 
CCAAAAGAAG TGACAGCCAT TCAGGCTGAA AATATGACCC GCGGAACAAC CGGCGTGTGT 
GTGCTGGCAG CACAAGCGGG CGCTAACGTC CACGTAGTTG ATGTTGGTAT TGATAGTGCT 
GAGCCTATCC CCGGGCTTAT CAACATGCGT GTCGCACGAG GTAGCGGCAA TATTGCTTCA 
GCTCCGGCAA TGAGTCGCCG TCAGGCTGAA AAGTTGCTTT TGGACGTCAT ATGTTATACG 
CGGGAGCTGG CAAAAAACGG TGTCACGCTG TTTGGTGTAG GTGAACTGGG GATGGCAAAC 
ACGACACCGG CAGCGGCAGC GGCAATAGTC AGCACAATCA CTGGCCGGGA TCCTGAAGAA 
GTGGTTGGGA TTGGCGCAAA CCTGCCGACA GATAAACTGG CTAATAAAAT TGATGTTGTG 
CGCCGGGCGA TTACGTTGAA TCAACCAAAT CCGCAGGATG GCGTTGATGT CCTGGCAAAA 
GTGGGTGGAT TTGATTTGGT CGGAATGGCT GGCGTGATGT TAGGCGCTGC TTCCTGCGGT 
TTACCCGTGT TGCTGGATGG ATTTCTTTCT TATGCTGCCG CGCTCGCAGC CTGCCAGATG 
TCTCCTGCAA TCAAACCGTA TCTCATTCCT TCTCACCTGT CGGCAGAAAA AGGGGCGCGT 
ATTGCGCTGT CGCATTTGGG GCTGGAGCCT TATCTCAATA TGGAGATGCG TTTAGGTGAG 
GGGAGTGGCG CAGCTCTGGC GATGCCCATC ATCGAAGCTG CCTGTGCGAT ATATAACAAC 
ATGGGCGAAC TTGCTGCCAG TAATATTGTT CTACCGGGGA ATACGACTTC TGATTTGAAC 
AGTTAA 

 

Protein sequence

MQTLADLLNT IPAIDPAAMS RAQRHIDGLL KPVGSLGRLE ALAIQLAGMP GLNGIPHVGK 
KAVLVMCADH GVWEEGVAIS PKEVTAIQAE NMTRGTTGVC VLAAQAGANV HVVDVGIDSA 
EPIPGLINMR VARGSGNIAS APAMSRRQAE KLLLDVICYT RELAKNGVTL FGVGELGMAN 
TTPAAAAAIV STITGRDPEE VVGIGANLPT DKLANKIDVV RRAITLNQPN PQDGVDVLAK 
VGGFDLVGMA GVMLGAASCG LPVLLDGFLS YAAALAACQM SPAIKPYLIP SHLSAEKGAR 
IALSHLGLEP YLNMEMRLGE GSGAALAMPI IEAACAIYNN MGELAASNIV LPGNTTSDLN 
S