| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0956 |
|---|
| Symbol | ruvB |
|---|
| ID | 6269157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 885037 |
|---|
| End bp | 886047 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641725110 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001879637 |
|---|
| Protein GI | 187732707 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00553774 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAG CAGACCGTCT GATTTCTGCC GGTACCACTT TGCCGGAAGA TGTAGCAGAT
CGCGCCATTC GCCCTAAATT ACTGGAAGAG TATGTTGGTC AGCCGCAGGT TCGTTCACAG
ATGGAGATTT TCATCAAAGC AGCGAAACTG CGCGGCGATG CCCTCGATCA TTTGTTGATT
TTTGGTCCTC CGGGGTTGGG TAAAACTACG CTTGCCAACA TTGTCGCCAA TGAAATGGGC
GTTAATTTAC GCACGACTTC TGGTCCGGTG CTGGAAAAGG CGGGCGATCT GGCAGCGATG
CTCACTAACC TTGAACCGCA TGACGTGCTG TTTATTGATG AGATCCACCG TTTATCGCCA
GTTGTTGAAG AAGTGCTGTA TCCGGCAATG GAAGACTACC AACTGGATAT CATTATTGGT
GAAGGTCCGG CGGCACGCTC CATTAAAATT GATTTGCCGC CGTTTACCCT GATTGGCGCA
ACCACGCGCG CAGGTTCGCT GACATCACCG TTGCGCGACC GTTTTGGTAT TGTGCAACGT
CTGGAGTTTT ATCAGGTGCC GGATCTGCAA TATATCGTTA GTCGCAGTGC ACGCTTTATG
GGGCTTGAGA TGAGTGATGA CGGCGCGCTG GAAGTTGCTC GTCGCGCTCG CGGTACGCCA
CGTATTGCCA ACCGTCTGCT GCGTCGAGTG CGTGATTTCG CCGAAGTGAA GCACGATGGC
ACCATCTCGG CAGATATCGC TGCTCAGGCG CTGGACATGT TGAATGTCGA TGCTGAAGGT
TTCGATTATA TGGACCGCAA ATTGTTGCTG GCGGTAATCG ATAAGTTCTT TGGTGGGCCG
GTAGGTCTGG ATAACCTGGC GGCGGCTATT GGCGAAGAAC GTGAAACCAT TGAGGATGTG
CTGGAACCTT ATTTGATTCA GCAAGGCTTT TTGCAGCGTA CACCGCGTGG GCGTATGGCG
ACGACGCGGG CGTGGAATCA CTTTGGCATA ACGCCGCCAG AAATGCCGTA A
|
|---|
| Protein sequence | MIEADRLISA GTTLPEDVAD RAIRPKLLEE YVGQPQVRSQ MEIFIKAAKL RGDALDHLLI
FGPPGLGKTT LANIVANEMG VNLRTTSGPV LEKAGDLAAM LTNLEPHDVL FIDEIHRLSP
VVEEVLYPAM EDYQLDIIIG EGPAARSIKI DLPPFTLIGA TTRAGSLTSP LRDRFGIVQR
LEFYQVPDLQ YIVSRSARFM GLEMSDDGAL EVARRARGTP RIANRLLRRV RDFAEVKHDG
TISADIAAQA LDMLNVDAEG FDYMDRKLLL AVIDKFFGGP VGLDNLAAAI GEERETIEDV
LEPYLIQQGF LQRTPRGRMA TTRAWNHFGI TPPEMP
|
|---|
| |