| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0952 |
|---|
| Symbol | |
|---|
| ID | 6272372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 881101 |
|---|
| End bp | 882423 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641725106 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001879633 |
|---|
| Protein GI | 187732045 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000381632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACAGA TAGCCCGCTC TGTCGCCCTG GCGTTTAATA ATTTACCGCG ACCACACCGC
GTTATGTTGG GGTCGCTCAC CGTTCTTACT CTGGCCGTCG CTGTCTGGCG GCCCTATGTT
TATCACCGCG ATGCCACGCC AATTGTCAAA ACCATTGAGC TGGAACAGAA CGAAATTCGT
TCGCTCTTAC CTGAAGCCAG TGAGCCGATT GATCAAGCTG CACAAGAAGA TGAAGCCATT
CCCCAGGACG AACTGGATGA CAAAATCGCC GGTGAAGCGG GTGTGCATGA ATATGTTGTT
TCCACTGGCG ATACGCTAAG CAGCATTCTC AATCAGTATG GTATTGATAT GGGTGATATC
ACCCAACTGG CTGCGGCCGA CAAAGAATTG CGTAACCTGA AAATCGGTCA ACAACTCTCC
TGGACATTAA CCGCGGACGG CGAACTGCAG CGCCTCACCT GGGAAGTGTC TCGTCGTGAA
ACCCGAACCT ATGACCGTAC TGCCGCTAAC GGTTTTAAAA TGACCAGCGA AATGCAGCAA
GGAGAGTGGG TTAACAATCT GCTGAAAGGT ACCGTCGGAG GAAGCTTTGT TGCCAGCGCC
AGAAACGCCG GTTTAACCAG CGCCGAAGTG AGCGCAGTGA TTAAAGCCAT GCAGTGGCAA
ATGGATTTCC GCAAACTGAA AAAAGGCGAT GAATTTGCGG TGTTAATGTC TCGAGAGATG
CTTGATGGTA AACGTGAGCA AAGCCAGCTG CTGGGCGTAC GTTTGCGTTC AGAAGGTAAA
GATTATTACG CAATCCGCGC TGAGGATGGC AAATTCTACG ACCGTAACGG TACTGGTCTG
GCGAAAGGAT TCTTGCGATT CCCGACGGCG AAACAGTTCC GTATCTCGTC TAACTTTAAC
CCGCGTCGTA CTAATCCGGT GACCGGTCGC GTTGCACCAC ACAGAGGTGT TGATTTCGCC
ATGCCGCAGG GTACGCCAGT GCTTTCAGTG GGTGACGGTG AAGTGGTGGT TGCCAAACGC
AGTGGCGCAG CAGGTTATTA TGTGGCTATT CGTCATGGTC GCAGCTACAC CACGCGTTAT
ATGCACTTGC GCAAGATTCT GGTGAAACCG GGACAGAAGG TGAAACGTGG CGACCGTATC
GCGCTTTCCG GTAATACCGG ACGTTCAACC GGGCCGCATC TGCACTATGA AGTATGGATA
AACCAGCAGG CCGTAAACCC GCTGACGGCA AAACTGCCGC GTACCGAAGG GCTGACCGGC
TCCGATCGTC GCGAATTCCT GGCGCAGGCC AAAGAGATTG TGCCGCAGCT ACGGTTTGAT
TAA
|
|---|
| Protein sequence | MQQIARSVAL AFNNLPRPHR VMLGSLTVLT LAVAVWRPYV YHRDATPIVK TIELEQNEIR
SLLPEASEPI DQAAQEDEAI PQDELDDKIA GEAGVHEYVV STGDTLSSIL NQYGIDMGDI
TQLAAADKEL RNLKIGQQLS WTLTADGELQ RLTWEVSRRE TRTYDRTAAN GFKMTSEMQQ
GEWVNNLLKG TVGGSFVASA RNAGLTSAEV SAVIKAMQWQ MDFRKLKKGD EFAVLMSREM
LDGKREQSQL LGVRLRSEGK DYYAIRAEDG KFYDRNGTGL AKGFLRFPTA KQFRISSNFN
PRRTNPVTGR VAPHRGVDFA MPQGTPVLSV GDGEVVVAKR SGAAGYYVAI RHGRSYTTRY
MHLRKILVKP GQKVKRGDRI ALSGNTGRST GPHLHYEVWI NQQAVNPLTA KLPRTEGLTG
SDRREFLAQA KEIVPQLRFD
|
|---|
| |