Gene SbBS512_E0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0922 
Symbol 
ID6272036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp860967 
End bp861662 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content54% 
IMG OID641725083 
Producthypothetical protein 
Protein accessionYP_001879610 
Protein GI187732185 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.679798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTAC AACACTGGCA GGCACAGTTC GAAAACTGGT TGAAAAACCA TCATCAGCAC 
CAGGACGCGG CCCATGACGT GTGTCATTTT CGCCGCGTCT GGGCTACGGC ACAGAAGCTG 
GCGGCAGATG ACGATGTCGA TATGCTGGTG ATTTTAACCG CCTGTTATTT TCACGATATT 
GTGAGCCTGG CGAAAAATCA TCCGCAAAGG CAGCGTTCTT CAATCCTGGC GGCAGAAGAG 
ACGCGTCGCC TGCTCCGTGA AGAGTTCGAG CAATTTCCGG CGGAGAAAAT CGAGGCCGTT 
TGTCATGTCA TTGCCGCTCA CAGTTTCAGC GCGCAAATCG CCCCCTTAAC AACGGAAGCT 
AAAATCGTCC AGGATGCGGA TCGGCTGGAA GCCCTGGGGG CGATTGGCCT GGCGCGCGTG 
TTTGCCGTTT CAGGGGCATT GGGCGTGGCG CTGTTTGATG GTGAAGATCC GTTCGCACAG 
CATCGCCCGC TTGATGATAA ACGCTACGCG CTGGATCATT TCCAGACTAA GTTGCTGAAG 
CTACCGCAAA CCATGCAAAC CGCAAGAGGC AAGCAGCTGG CGCAGCACAA CGCGCATTTT 
TTAGTCGAGT TTATGGCGAA GCTCAGTGCC GAACTGGCGG GGGAGAATGA AGGTGTCGAT 
CACAAGGTGA TAGATGCGTT TTCACCCGCG GGATAA
 
Protein sequence
MDLQHWQAQF ENWLKNHHQH QDAAHDVCHF RRVWATAQKL AADDDVDMLV ILTACYFHDI 
VSLAKNHPQR QRSSILAAEE TRRLLREEFE QFPAEKIEAV CHVIAAHSFS AQIAPLTTEA 
KIVQDADRLE ALGAIGLARV FAVSGALGVA LFDGEDPFAQ HRPLDDKRYA LDHFQTKLLK 
LPQTMQTARG KQLAQHNAHF LVEFMAKLSA ELAGENEGVD HKVIDAFSPA G