Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0916 |
Symbol | hchA |
ID | 6273305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 855366 |
End bp | 856217 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641725077 |
Product | chaperone protein HchA |
Protein accession | YP_001879604 |
Protein GI | 187732593 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000778732 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTC AAACAAGTAA AAATCCGCAG GTCGATATTG CTGAAGATAA TGCGTTCTTC CCTTCAGAAT ATTCGCTTAG CCAATATACC AGTCCCGTCT CTGATCTTGA TGGCGTGGAC TATCCAAAAC CGTATCGCGG TAAGCATAAA ATTCTGGTGA TCGCCGCGGA CGAACGTTAT TTGCCAACCG ATAACGGAAA ACTGTTCTCG ACCGGTAACC ATCCGATTGA AACGTTGCTG CCGTTGTATC ATCTCCATGC TGCAGGTTTC GAATTCGAAG TGGCGACCAT TTCCGGTCTG ATGACCAAGT TTGAATACTG GGCTATGCCG CACAAAGATG AAAAAGTAAT GCCATTCTTT GAGCAGCATA AATCGTTGTT CCGCAATCCG AAGAAACTCG CGGATGTTGT CGCCAGCCTC AACGCTGATA GCGAATATGC AGCAATCTTT GTTCCTGGTG GTCATGGCGC ACTTATTGGT TTACCTGAAA GCCAGGACGT AGCTGCCGCT TTACAGTGGG CAATCAAAAA TGACCGTTTT GTTATCTCCC TTTGCCACGG CCCGGCGGCT TTTCTGGCGC TTCGCCACGG CGATAACCCA CTGAATGGTT ATTCCATTTG CGCATTCCCA GACGCCGCAG ACAAACAAAC GCCAGAGATA GGCTATATGC CGGGTCATCT CACCTGGTAC TTCGGCGAAG AGCTGAAGAA AATGGGCATG AACATTATTA ATGACGACAT CACCGGGCGA GTACATAAGG ACCGTAAAGT TCTCACCGGC GACAGTCCTT TCGCAGCGAA TGCGTTGGGT AAACTGGCGG CGCAGGAAAT GCTGGCAGCT TATGCGGGTT AA
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Protein sequence | MTVQTSKNPQ VDIAEDNAFF PSEYSLSQYT SPVSDLDGVD YPKPYRGKHK ILVIAADERY LPTDNGKLFS TGNHPIETLL PLYHLHAAGF EFEVATISGL MTKFEYWAMP HKDEKVMPFF EQHKSLFRNP KKLADVVASL NADSEYAAIF VPGGHGALIG LPESQDVAAA LQWAIKNDRF VISLCHGPAA FLALRHGDNP LNGYSICAFP DAADKQTPEI GYMPGHLTWY FGEELKKMGM NIINDDITGR VHKDRKVLTG DSPFAANALG KLAAQEMLAA YAG
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