Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0914 |
Symbol | |
ID | 6269862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 853118 |
End bp | 853900 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641725075 |
Product | transcriptional regulatory protein YedW |
Protein accession | YP_001879602 |
Protein GI | 187732444 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000013212 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTG AGGATAGCGA AAAAATGTCC AGGGTAACCT TACAGCAGCA TTACAATTTT GTAATGAACC AGGCTGTTTC TATAACATAT GATTTATGGC ATATTATTTT CATGAAGATT TTACTTATTG AAGATAATCA AAGGACCCAG GAATGGGTAA CACAAGGGCT TTCCGAAGCG GGTTATGTCA TTGATGCCGT TTCTGATGGC AGAGATGGGC TTTATCTTGC GCTGAAGGAT GATTATGCAT TGATCATTTT GGATATTATG CTTCCGGGTA TGGATGGCTG GCAGATCTTA CAAACGTTAA GAACAGCAAA GCAAACCCCT GTTATTTGCC TTACTGCAAG GGATTCTGTC GATGACAGAG TCAGAGGGCT GGACAGTGGA GCAAATGATT ATCTGGTAAA ACCTTTTTCA TTTTCTGAGT TGCTGGCAAG GGTTCGGGCA CAATTAAGGC AACATCACGC TTTGAATTCA ACATTAGAAA TCAGTGGCTT AAGAATGGAC TCTGTAAGTC AAAGTGTGAG CAGGGACAAT ATCAGTATTA CACTGACGCG CAAGGAGTTT CAGTTACTTT GGCTACTGGC CTCCAGAGCT GGCGAAATTA TACCCAGAAC GGTTATTGCG AGTGAAATTT GGGGAATCAA CTTTGATAGT GATACCAATA CGGTGGATGT CGCCATTCGC AGGCTCCGCG CAAAAGTTGA TGATCCTTTT CCTGAAAAGC TAATCGCCAC AATACGGGGG ATGGGCTATT CATTCGTAGC GGTAAAAAAA TAA
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Protein sequence | MSFEDSEKMS RVTLQQHYNF VMNQAVSITY DLWHIIFMKI LLIEDNQRTQ EWVTQGLSEA GYVIDAVSDG RDGLYLALKD DYALIILDIM LPGMDGWQIL QTLRTAKQTP VICLTARDSV DDRVRGLDSG ANDYLVKPFS FSELLARVRA QLRQHHALNS TLEISGLRMD SVSQSVSRDN ISITLTRKEF QLLWLLASRA GEIIPRTVIA SEIWGINFDS DTNTVDVAIR RLRAKVDDPF PEKLIATIRG MGYSFVAVKK
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