Gene SbBS512_E0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0914 
Symbol 
ID6269862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp853118 
End bp853900 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content42% 
IMG OID641725075 
Producttranscriptional regulatory protein YedW 
Protein accessionYP_001879602 
Protein GI187732444 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000013212 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG AGGATAGCGA AAAAATGTCC AGGGTAACCT TACAGCAGCA TTACAATTTT 
GTAATGAACC AGGCTGTTTC TATAACATAT GATTTATGGC ATATTATTTT CATGAAGATT
TTACTTATTG AAGATAATCA AAGGACCCAG GAATGGGTAA CACAAGGGCT TTCCGAAGCG
GGTTATGTCA TTGATGCCGT TTCTGATGGC AGAGATGGGC TTTATCTTGC GCTGAAGGAT
GATTATGCAT TGATCATTTT GGATATTATG CTTCCGGGTA TGGATGGCTG GCAGATCTTA
CAAACGTTAA GAACAGCAAA GCAAACCCCT GTTATTTGCC TTACTGCAAG GGATTCTGTC
GATGACAGAG TCAGAGGGCT GGACAGTGGA GCAAATGATT ATCTGGTAAA ACCTTTTTCA
TTTTCTGAGT TGCTGGCAAG GGTTCGGGCA CAATTAAGGC AACATCACGC TTTGAATTCA
ACATTAGAAA TCAGTGGCTT AAGAATGGAC TCTGTAAGTC AAAGTGTGAG CAGGGACAAT
ATCAGTATTA CACTGACGCG CAAGGAGTTT CAGTTACTTT GGCTACTGGC CTCCAGAGCT
GGCGAAATTA TACCCAGAAC GGTTATTGCG AGTGAAATTT GGGGAATCAA CTTTGATAGT
GATACCAATA CGGTGGATGT CGCCATTCGC AGGCTCCGCG CAAAAGTTGA TGATCCTTTT
CCTGAAAAGC TAATCGCCAC AATACGGGGG ATGGGCTATT CATTCGTAGC GGTAAAAAAA
TAA
 
Protein sequence
MSFEDSEKMS RVTLQQHYNF VMNQAVSITY DLWHIIFMKI LLIEDNQRTQ EWVTQGLSEA 
GYVIDAVSDG RDGLYLALKD DYALIILDIM LPGMDGWQIL QTLRTAKQTP VICLTARDSV
DDRVRGLDSG ANDYLVKPFS FSELLARVRA QLRQHHALNS TLEISGLRMD SVSQSVSRDN
ISITLTRKEF QLLWLLASRA GEIIPRTVIA SEIWGINFDS DTNTVDVAIR RLRAKVDDPF
PEKLIATIRG MGYSFVAVKK