Gene SbBS512_E0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0910 
Symbol 
ID6272750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp850027 
End bp850677 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID641725071 
Producthypothetical protein 
Protein accessionYP_001879598 
Protein GI187730687 
COG category[R] General function prediction only 
COG ID[COG3443] Predicted periplasmic or secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00199548 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGATTC GTCTTCACAA ACTGGCTGTT GCGTTAGGTG TCTTTATTGT TAGCGCTCCT 
GCCTTTTCGC ATGGTCATCA CTCACACGGC AAACCCTTAA CAGAGGTCGA ACAAAAAGCT 
GCTAATGGTG TTTTTGATGA TGCCAATGTA CAAAACCGAA CGCTCAGTGA CTGGGATGGA 
GTCTGGCAAT CCGTTTATCC TTTACTGCAA AGTGGCAAAC TTGACCCCGT CTTTCAGAAG 
AAAGCGGATG CAGATAAAAC TAAAACATTT GCTGAAATTA AAGATTATTA TCACAAAGGT 
TATGCAACAG ATATCGAGAT GATTGGCATT GAGGACGGCA TTGTTGAATT CCATAGAAAT 
AATGAAACAA CATCCTGTAA ATATGATTAC GATGGATACA AAATACTCAC CTATAAATCA 
GGCAAGAAAG GCGTTCGTTA CTTATTCGAA TGTAAAGATC CTGAAAGCAA AGCCCCTAAA 
TATATACAAT TTAGCGATCA TATAATTGCA CCACGAAAAT CATCTCATTT TCACATTTTT 
ATGGGTAATG ATTCACAGCA ATCTTTATTA AATGAAATGG AAAACTGGCC AACGTATTAT 
CCATATCAGT TGAGTAGCGA AGAAGTGGTC GAGGAAATGA TGTCTCATTG A
 
Protein sequence
MAIRLHKLAV ALGVFIVSAP AFSHGHHSHG KPLTEVEQKA ANGVFDDANV QNRTLSDWDG 
VWQSVYPLLQ SGKLDPVFQK KADADKTKTF AEIKDYYHKG YATDIEMIGI EDGIVEFHRN 
NETTSCKYDY DGYKILTYKS GKKGVRYLFE CKDPESKAPK YIQFSDHIIA PRKSSHFHIF 
MGNDSQQSLL NEMENWPTYY PYQLSSEEVV EEMMSH