| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0894 |
|---|
| Symbol | |
|---|
| ID | 6270917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 833877 |
|---|
| End bp | 835382 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641725056 |
|---|
| Product | head-tail preconnector protein GP5 |
|---|
| Protein accession | YP_001879583 |
|---|
| Protein GI | 187733678 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGACGTA ATCTTTCACA CATTATTGCA GCAGCATTCA ATGAACCGCT GCTTCTGGAG
CCCGCCTATG CGCGGGTTTT CTTTTGCGCG CTGGGGCGCG AGATGGGGGC AGCAAGTCTT
TCGGTACCGC AACAGCAGGT ACAGCTTGAT GCTCCCGGGA TGCTGGCTGA AACGGACGAG
TACATGGCCG GAGGTAAACG ACCGGCCCGT GTTTACCGGG TGGTGAACGG TATTGCGGTA
CTGCCGGTGA CCGGCACGCT GGTGCACCGG CTGGGGGGGA TGCGGCCATT TTCCGGAATG
ACTGGCTATG ACGGCATTGT CACCTGTCTT CAGCAGGCAA TGGCAGATAG CCAGGTGCGG
GGCATACTGC TGGACATTGA CAGTCCGGGC GGGCAGGCCG CCGGCGTGTT TGACTGCGCT
GACATGATTT ACCGCCTCCG GCAGCAGAAG CCGGTCTGGG CACTGTGTAA TGACACGGCC
TGTTCTGCGG CCATGCTGCT GGCGTCGGCC TGCTCCCGAC GGCTGGTTAC CCAGACATCC
CTTATCGGTT CCATTGGCGT GATGATGAGC CATGTCAGCT ATGCCGGTCA TCTGGCGCAG
GCCGGTGTGG ATATCACGCT GATTTACTCA GGGGCGCACA AGGTGGATGG CAATCAGTTT
GAAGCGTTGC CGGCAGAGGT TCGCCAGGAC ATGCAGCAGC GGATTGATGC GGCGCGCCGG
ATGTTTGCCG AAAAAGTGGC GATGTTTACC GGTCTGTCTG TTGATGCAGT CACGGGAACA
GAGGCCGCTG TTTTTGAAGG TCAGTCCGGC ATTGAGGCCG GGCTGGCGGA TGAATTAATC
AATGCGTCGG ATGCCATCAG TGTGATGGCC ACGGCGCTGA ACAGTAATGT CAGAGGAGGC
ACTATGCCGC AATTAACTGC AACGGAAGCC GCCGTGCAGG AGAACCAGCG AGTGATGGGG
ATCCTGACAT GCCAGGAAGC GAAAGGACGT GAACAGCTTG CCACGATGCT GGCAGGGCAA
CAGGGCATGA GCGTTGAACA GGCCCGGGCG ATTCTGGCCG CGGCGGCACC GCAGCAGCCG
GTGGCATCCG CGCAGAGTGA AGCCGATCGC ATTATGGCGT GTGAAGAAGC GAACGGTCGT
GAACAACTGG CGGCAACGCT GGCGGCGATG CCGGAGATGA CGGTGGAAAA AGCCCGCCCG
ATCCTGGCGG CTGCACCACT GGCGGATGCC GGGCCCTCAC TTCGTGATCA GATCATGGCC
CTGGATGAGG CAAAAGGGGC AGAAGCGCAG GCTGAAAAAC TGGCGACCTG CCCGGGAATG
ACCGTGGAGA ACGCCCGGGC TGTGCTGGCT GCGGGATCAG GTAAGGCCGA ACCGGTCTCT
GCATCCACAA CCGCCCTGTT TGAACATTTC ATGGCGAATC ATTCACCGGC AGCGGTGCGG
GGTGGCGTGT CACAGACGTC AGCAGACGGT GATGCGGACG TGAAAATGCT CATGGCCATG
CCATGA
|
|---|
| Protein sequence | MRRNLSHIIA AAFNEPLLLE PAYARVFFCA LGREMGAASL SVPQQQVQLD APGMLAETDE
YMAGGKRPAR VYRVVNGIAV LPVTGTLVHR LGGMRPFSGM TGYDGIVTCL QQAMADSQVR
GILLDIDSPG GQAAGVFDCA DMIYRLRQQK PVWALCNDTA CSAAMLLASA CSRRLVTQTS
LIGSIGVMMS HVSYAGHLAQ AGVDITLIYS GAHKVDGNQF EALPAEVRQD MQQRIDAARR
MFAEKVAMFT GLSVDAVTGT EAAVFEGQSG IEAGLADELI NASDAISVMA TALNSNVRGG
TMPQLTATEA AVQENQRVMG ILTCQEAKGR EQLATMLAGQ QGMSVEQARA ILAAAAPQQP
VASAQSEADR IMACEEANGR EQLAATLAAM PEMTVEKARP ILAAAPLADA GPSLRDQIMA
LDEAKGAEAQ AEKLATCPGM TVENARAVLA AGSGKAEPVS ASTTALFEHF MANHSPAAVR
GGVSQTSADG DADVKMLMAM P
|
|---|
| |