Gene SbBS512_E0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0844 
Symbol 
ID6273011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp792188 
End bp793114 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content55% 
IMG OID641725015 
ProductABC transporter, quaternary amine uptake (QAT) family, ATP-binding protein 
Protein accessionYP_001879542 
Protein GI187732357 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT TTAGCCATGT CAGCAAACTG TTTGGCGCAC AAAAAGCCGT TAACGATCTC 
AATCTCAATT TTCAGGAAGG GAGTTTTTCG GTGCTGATTG GCACATCTGG CTCCGGCAAA
TCCACCACCC TGAAAATGAT TAACCGCCTG GTGGAACATG ACAGCGGAGA GATCCGCTTT
GCCGGAGAAG AAATTCGCTC GCTGCCAGTA CTGGAGTTGC GCCGCCGTAT GGGCTATGCC
ATTCAATCTA TTGGCCTGTT TCCCCACTGG AGCGTGGCAC AAAACATTGC CACCGTGCCG
CAATTACAAA AATGGTCGCG GGCGAGGATT GACGATCGTA TCGACGAATT AATGGCGCTA
CTGGGGCTGG AGTCAAATTT ACGTGAGCGT TATCCGCATC AGCTTTCCGG TGGTCAGCAG
CAACGTGTGG GAGTAGCGCG CGCACTGGCT GCCGATCCGC AAGTCTTACT GATGGATGAA
CCTTTTGGCG CACTGGACCC GGTAACGCGC GGCGCGTTGC AACAAGAGAT GACGCGCATT
CACCGTTTGC TGGGGCGTAC CATTGTGCTG GTTACTCATG ATATTGATGA GGCGCTACGG
CTGGCAGAAC ATCTGGTATT GATGGATCAC GGTGAAGTGG TGCAGCAGGG GAATCCGCTG
ACGATGCTGA CTCGTCCGGC GAATGATTTT GTCCGCCAGT TTTTTGGACG TAGTGAACTG
GGTGTGCGCC TGCTTTCGTT ACGTAGTGTG GCGGATTACG TGCGTCGCGA AGAACGGGCA
GAAGGTGAGG CACTGGCAGA AGAGATGACG CTGCGCGATG CGCTCTCCCT GTTTGTCGCG
CGGGGATGCG AGGTGCTGCC GGTGGTGAAC ACGCAGGGCC AGCCTAGCGG CACGCTGCAT
TTTCAGGATC TGCTGGAGGA GGCGTAA
 
Protein sequence
MIEFSHVSKL FGAQKAVNDL NLNFQEGSFS VLIGTSGSGK STTLKMINRL VEHDSGEIRF 
AGEEIRSLPV LELRRRMGYA IQSIGLFPHW SVAQNIATVP QLQKWSRARI DDRIDELMAL
LGLESNLRER YPHQLSGGQQ QRVGVARALA ADPQVLLMDE PFGALDPVTR GALQQEMTRI
HRLLGRTIVL VTHDIDEALR LAEHLVLMDH GEVVQQGNPL TMLTRPANDF VRQFFGRSEL
GVRLLSLRSV ADYVRREERA EGEALAEEMT LRDALSLFVA RGCEVLPVVN TQGQPSGTLH
FQDLLEEA