Gene SbBS512_E0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0814 
Symbol 
ID6269363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp765129 
End bp766286 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content54% 
IMG OID641724989 
Producthypothetical protein 
Protein accessionYP_001879516 
Protein GI187732333 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGCA ACGTAACGCT CGATTTTGTT CGCGGCGTCG CCATTCTGGG GATCCTGCTA 
TTAAACATCA GCGCCTTTGG GCTACCAAAG GCGGCTTATC TCAATCCCGC TTGGTACGGC
GCTATTACGC CGCAGGATGC ATGGACCTGG GCATTTCTCG ATCTCATCGG CCAGGTGAAA
TTCCTCACGC TTTTTGCGCT GCTGTTTGGT GCGGGCCTGC AAATGTTGCT GCCCCGTGGC
AGACGCTGGA TCCAGTCGCG GTTAACGCTG TTAGTCTTGC TGGGTTTTAT TCACGGTTTA
TTGTTCTGGG ACGGCGATAT TCTGCTGGCT TACGGGCTGG TGGGCTTAAT CTGCTGGCGG
CTGGTGCGCG ATGCGCCATC GGTAAAAAGC CTGTTTAATA CAGGCGTCAT GCTTTATCTG
GTGGGGCTTG GCGTTTTGCT GTTATTGGGG CTGATTTCCG ACAGCCAGAC CAGCCGCGCC
TGGACGCCGG ATGCATCGGC TATTTTGTAT GAAAAATACT GGAAGCTTCA CGGCGGCGTT
GAAGCAATCA GTAATCGTGC CGATGGTGTT GGCAACAGTT TACTGGCACT GGGCGCACAG
TATGGCTGGC AACTGGCAGG GATGATGCTC ATTGGTGCGG CGCTGATGCG CAGCGGCTGG
CTGAAAGGGC AGTTCAGCTT ACGTCACTAT CGTCGTACTG GTTTTGTGCT GGTGGCGATT
GGGGTGACTA TTAACCTTCC TGCCATCGCC CTGCAATGGC AGCTGGACTG GGCGTATCGC
TGGTGTGCCT TCTTACTTCA AATGCCGCGG GAACTGAGTG CGCCGTTTCA GGCGATTGGC
TATGCGTCGC TGTTTTATGG CTTCTGGCCG CAATTGAGCC GCTTTAAGCT GGTGCTTGCG
ATCGCCTGCG TCGGACGGAT GGCGCTGACC AACTATCTAT TGCAAACGCT GATTTGTACC
ATGCTTTTTT ACCACCTCGG TTTGTTTATG CATTTTGACC GCCTGGAGCT GCTGGCGTTT
GTTATTCCGG TATGGCTGGC GAATATCCTC TTCTCTGTTA TCTGGCTGCG TTACTTCCGC
CAGGGGCCGG TGGAATGGCT CTGGCGTCAG TTAACTTTGC GTGCTGCCGG AACGGCAATA
TCTAAAACAT CAAGATAA
 
Protein sequence
MERNVTLDFV RGVAILGILL LNISAFGLPK AAYLNPAWYG AITPQDAWTW AFLDLIGQVK 
FLTLFALLFG AGLQMLLPRG RRWIQSRLTL LVLLGFIHGL LFWDGDILLA YGLVGLICWR
LVRDAPSVKS LFNTGVMLYL VGLGVLLLLG LISDSQTSRA WTPDASAILY EKYWKLHGGV
EAISNRADGV GNSLLALGAQ YGWQLAGMML IGAALMRSGW LKGQFSLRHY RRTGFVLVAI
GVTINLPAIA LQWQLDWAYR WCAFLLQMPR ELSAPFQAIG YASLFYGFWP QLSRFKLVLA
IACVGRMALT NYLLQTLICT MLFYHLGLFM HFDRLELLAF VIPVWLANIL FSVIWLRYFR
QGPVEWLWRQ LTLRAAGTAI SKTSR