Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0796 |
Symbol | fruA |
ID | 6270411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 746547 |
End bp | 748238 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641724975 |
Product | PTS system fructose-specific transporter subunits IIBC |
Protein accession | YP_001879502 |
Protein GI | 187732042 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00918032 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGC TGCTGATTAT TGACGCTAAT CTCGGTCAGG CACGCGCCTA TATGGCGAAG ACCCTGCTGG GCGCGGCGGC GCGAAAAGCA AAACTGGAAA TCATCGACAA TCCGAACGAC GCAGAAATGG CGATTGTTCT CGGTGATTCC ATCCCGAATG ACAGCGCGCT GAACGGTAAA AATGTCTGGC TGGGTGATAT TTCCCGGGCA GTTGCGCACC CTGAGCTGTT CCTGAGTGAA GCCAAAGGCC ATGCGAAACC TTACACTGCG CCGGTCGCTG CGACAGCACC GGTTGCTGCC AGCGGTCCGA AACGCGTAGT TGCGGTGACT GCTTGCCCGA CTGGCGTAGC ACACACCTTT ATGGCGGCTG AAGCCATTGA AACCGAAGCG AAAAAACGTG GCTGGTGGGT GAAAGTTGAA ACCCGTGGTT CTGTTGGCGC GGGCAATGCA ATCACCCCTG AAGAAGTCGC AGCAGCGGAT CTGGTGATTG TGGCGGCAGA TATCGAAGTG GATCTGGCGA AATTTGCTGG TAAACCGATG TATCGTACCT CTACCGGTCT GGCGCTGAAG AAAACCGCGC AGGAACTGGA TAAAGCGGTT GCTGAAGCAA CGCCGTATGA ACCGGCGGGC AAAGCTCAAA CGGCGACCAC TGAAGGTAAG AAAGAGAGTG CAGGCGCTTA CCGTCACTTG CTAACAGGCG TCTCTTATAT GCTGCCGATG GTCGTCGCAG GTGGTCTGTG TATCGCGCTT TCTTTTGCTT TTGGTATCGA AGCGTTTAAA GAGCCGGGTA CGTTGGCAGC GGCGCTGATG CAGATTGGCG GTGGTTCAGC CTTTGCGCTG ATGGTGCCGG TACTGGCAGG TTATATTGCC TTCTCCATTG CCGATCGTCC GGGCCTCACG CCGGGTCTGA TTGGCGGTAT GCTGGCGGTC AGCACCGGTT CTGGCTTTAT TGGCGGTATA ATTGCTGGCT TCCTGGCTGG TTACATTGCG AAGTTAATCA GTACGCAACT GAAACTGCCA CAGAGTATGG AGGCGCTGAA ACCGATCCTG ATCATTCCGC TAATTTCCAG TCTGGTGGTC GGTCTGGCGA TGATCTACCT GATCGGTAAA CCAGTTGCTG GCATTCTCGA AGGGCTGACT CACTGGCTGC AGACCATGGG GACTGCGAAT GCGGTTCTGC TGGGGGCGAT CCTCGGTGGC ATGATGTGTA CTGACATGGG CGGTCCGGTA AACAAAGCAG CGTACGCATT CGGTGTGGGT CTGCTGAGTA CTCAAACCTA TGGCCCGATG GCGGCGATTA TGGCGGCAGG TATGGTGCCA CCGCTGGCAA TGGGTCTGGC AACAATGGTG GCGCGTCGCA AATTCGACAA AGCGCAGCAG GAAGGTGGCA AAGCCGCTCT GGTATTGGGA CTGTGCTTCA TTTCGGAAGG TGCAATTCCG TTTGCTGCTC GTGATCCGAT GCGTGTGCTG CCGTGCTGTA TCGTGGGTGG GGCGCTGACT GGCGCAATCT CAATGGCGAT TGGTGCGAAA CTGATGGCAC CGCACGGTGG TCTGTTTGTT CTGCTGATCC CTGGCGCTAT TACGCCGGTA CTGGGTTACC TGGTAGCAAT TATTGCCGGT ACGCTGGTGG CGGGTTTGGC CTATGCCTTC CTGAAACGTC CGGAAGTGGA CGCAGTAGCG AAAGCAGCGT AA
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Protein sequence | MKTLLIIDAN LGQARAYMAK TLLGAAARKA KLEIIDNPND AEMAIVLGDS IPNDSALNGK NVWLGDISRA VAHPELFLSE AKGHAKPYTA PVAATAPVAA SGPKRVVAVT ACPTGVAHTF MAAEAIETEA KKRGWWVKVE TRGSVGAGNA ITPEEVAAAD LVIVAADIEV DLAKFAGKPM YRTSTGLALK KTAQELDKAV AEATPYEPAG KAQTATTEGK KESAGAYRHL LTGVSYMLPM VVAGGLCIAL SFAFGIEAFK EPGTLAAALM QIGGGSAFAL MVPVLAGYIA FSIADRPGLT PGLIGGMLAV STGSGFIGGI IAGFLAGYIA KLISTQLKLP QSMEALKPIL IIPLISSLVV GLAMIYLIGK PVAGILEGLT HWLQTMGTAN AVLLGAILGG MMCTDMGGPV NKAAYAFGVG LLSTQTYGPM AAIMAAGMVP PLAMGLATMV ARRKFDKAQQ EGGKAALVLG LCFISEGAIP FAARDPMRVL PCCIVGGALT GAISMAIGAK LMAPHGGLFV LLIPGAITPV LGYLVAIIAG TLVAGLAYAF LKRPEVDAVA KAA
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