Gene SbBS512_E0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0784 
Symbol 
ID6270645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp737613 
End bp738362 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content43% 
IMG OID641724965 
ProductPAP2 family protein 
Protein accessionYP_001879492 
Protein GI187732319 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.248881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTGCGT TTTTCAGTAA GATAATTAGA GAAAATATGA TTAAAAATTT GCCGCAAATA 
GTGTTGTTGA ATATTGTCAG CCTCGCGCTG TTTCTTTCCT GGTATATTCC CGTTAATCAT
GGATTATGGT TGCCGATTGA TGCGGATATT TTTTATTTCT TTAATCAGAA ACTGGTCGAA
AGTAAGGCCT TTTTATGGCT GGTTGCATTG ACCAACAATC GCGCTTTCGA CGGTTGTTCT
CTGCTGGCGA TGGGAATGTT GATGCTGAGT TTCTGGCTGA AAGAAAACGC CCCAGGCAGA
CGACGTATCG TGATTATTGG TCTGGTAATG CTATTAACTG CAGTGGTATT AAACAAGCTG
GGTCAGGCAT TAATTCCTGT AAAACGGGCC AGCCCAACAT TGACGTTTAC TAATATTAAC
CGCGTCAGCG AACTGCTCTC TGTCCCCACG AAAGATGCCT CACGAGATAG CTTTCCCGGC
GATCACGGCA TGATGCTGCT TATTTTTTCG GCATTCATGT GGCGTTATTT CGGTAAAGTT
GCAGGTCTTA TCGCCCTTAT TATTTTTGTG GTTTTTGCGT TTCCCAGAGT AATGATTGGC
GCACACTGGT TTACTGACAT CATTGTCGGT TCGATGACCG TGATATTGAT CGGTTTGCCC
TGGGTGTTGC TGACGCCATT AAGTGATCGA TTAATCACCT TTTTTGACAA ATCACTACCG
GGAAAAAACA AACATTTCCA AAACAAATAA
 
Protein sequence
MPAFFSKIIR ENMIKNLPQI VLLNIVSLAL FLSWYIPVNH GLWLPIDADI FYFFNQKLVE 
SKAFLWLVAL TNNRAFDGCS LLAMGMLMLS FWLKENAPGR RRIVIIGLVM LLTAVVLNKL
GQALIPVKRA SPTLTFTNIN RVSELLSVPT KDASRDSFPG DHGMMLLIFS AFMWRYFGKV
AGLIALIIFV VFAFPRVMIG AHWFTDIIVG SMTVILIGLP WVLLTPLSDR LITFFDKSLP
GKNKHFQNK