Gene SbBS512_E0740 details

Gene Information

• Locus tag: SbBS512_E0740
• Symbol: ccmA
• ID: 6268591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 698518
• End bp: 699135
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641724926
• Product: cytochrome c biogenesis protein CcmA
• Protein accession: YP_001879454
• Protein GI: 187732034
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component
• TIGRFAM ID: [TIGR01189] heme ABC exporter, ATP-binding protein CcmA

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAAG CCAGAGAGTT ACTTTGTGAG CGGGATGAAC GAACCTTATT TAGTGGCTTG 
TCATTTACGC TGAACGCAGG AGAGTGGGTA CAAATCACCG GTAGCAACGG CGCGGGGAAG 
ACAACGCTTC TCCGTTTGCT GACGGGGTTG TCTCGCCCTG ACGCAGGCGA GGTTCTCTGG 
CAAGGGCAGC CCTTGCATCA GGTACGCGAC AGCTACCATC AAAACCTGTT ATGGATAGGC 
CATCAGCCGG GGATCAAAAC CCGGCTGACG GCGTTAGAAA ATCTGCACTT TTATCATCGC 
GATGGCGATA CCGCACAATG TCTGGAAGCC CTGGCGCAGG CCGGGCTTGC CGGATTCGAA 
GATATTCCTG TAAATCAGCT CTCGGCCGGG CAACAACGCC GCGTCGCTTT AGCGCGTCTG 
TGGCTGACCC GTGCCACGTT ATGGATCCTC GACGAGCCTT TTACCGCGAT TGACGTTAAC 
GGCGTCGATC GTCTGACCCA GCGTATGGCG CAGCATACGG AGCAGGGGGG GATTGTGATT 
CTGACTACCC ACCAGCCGCT CAACGTTGCT GAAAGTAAAA TTCGCCGCAT TTCACTGACG 
CAAACGAGGG CCGCATGA 

 

Protein sequence

MLEARELLCE RDERTLFSGL SFTLNAGEWV QITGSNGAGK TTLLRLLTGL SRPDAGEVLW 
QGQPLHQVRD SYHQNLLWIG HQPGIKTRLT ALENLHFYHR DGDTAQCLEA LAQAGLAGFE 
DIPVNQLSAG QQRRVALARL WLTRATLWIL DEPFTAIDVN GVDRLTQRMA QHTEQGGIVI 
LTTHQPLNVA ESKIRRISLT QTRAA